Difference between revisions of "Book:LIMSjournal: 2015 Edition"
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== LIMSjournal == | == LIMSjournal: 2015 Edition == | ||
This collection of 27 open-access journal articles loaded to LIMSwiki in 2015 is compiled as a convenient, easy-to-access compilation. It is organized alphabetically by topic, with the first author and publication year appearing for your convenience. | |||
;Bioinformatics | ;1. Bioinformatics | ||
:[[Journal:4273π: Bioinformatics education on low cost ARM hardware]] | :[[Journal:4273π: Bioinformatics education on low cost ARM hardware|4273π: Bioinformatics education on low cost ARM hardware (Barker ''et al.'' 2013)]] | ||
:[[Journal:AdLIMS: A customized open source software that allows bridging clinical and basic molecular research studies]] | :[[Journal:AdLIMS: A customized open source software that allows bridging clinical and basic molecular research studies|adLIMS: A customized open source software that allows bridging clinical and basic molecular research studies (Calabria ''et al.'' 2015)]] | ||
:[[Journal:ILAP: A workflow-driven software for experimental protocol development, data acquisition and analysis]] | :[[Journal:ILAP: A workflow-driven software for experimental protocol development, data acquisition and analysis|iLAP: A workflow-driven software for experimental protocol development, data acquisition and analysis (Stocker ''et al.'' 2009)]] | ||
:[[Journal:Launching genomics into the cloud: Deployment of Mercury, a next generation sequence analysis pipeline]] | :[[Journal:Launching genomics into the cloud: Deployment of Mercury, a next generation sequence analysis pipeline|Launching genomics into the cloud: Deployment of Mercury, a next generation sequence analysis pipeline (Reid ''et al.'' 2014)]] | ||
:[[Journal:MendeLIMS: A web-based laboratory information management system for clinical genome sequencing]] | :[[Journal:MendeLIMS: A web-based laboratory information management system for clinical genome sequencing|MendeLIMS: A web-based laboratory information management system for clinical genome sequencing (Grimes ''et al.'' 2014)]] | ||
:[[Journal:Personalized Oncology Suite: Integrating next-generation sequencing data and whole-slide bioimages]] | :[[Journal:Personalized Oncology Suite: Integrating next-generation sequencing data and whole-slide bioimages|Personalized Oncology Suite: Integrating next-generation sequencing data and whole-slide bioimages (Dander ''et al.'' 2014)]] | ||
:[[Journal:Requirements for data integration platforms in biomedical research networks: A reference model]] | :[[Journal:Requirements for data integration platforms in biomedical research networks: A reference model|Requirements for data integration platforms in biomedical research networks: A reference model (Ganzinger ''et al.'' 2015)]] | ||
:[[Journal:SaDA: From sampling to data analysis—An extensible open source infrastructure for rapid, robust and automated management and analysis of modern ecological high-throughput microarray data]] | :[[Journal:SaDA: From sampling to data analysis—An extensible open source infrastructure for rapid, robust and automated management and analysis of modern ecological high-throughput microarray data|SaDA: From sampling to data analysis—An extensible open source infrastructure for rapid, robust and automated management and analysis of modern ecological high-throughput microarray data (Singh ''et al.'' 2015)]] | ||
:[[Journal:SeqWare Query Engine: Storing and searching sequence data in the cloud]] | :[[Journal:SeqWare Query Engine: Storing and searching sequence data in the cloud|SeqWare Query Engine: Storing and searching sequence data in the cloud (O’Connor ''et al.'' 2010)]] | ||
:[[Journal:University-level practical activities in bioinformatics benefit voluntary groups of pupils in the last 2 years of school]] | :[[Journal:University-level practical activities in bioinformatics benefit voluntary groups of pupils in the last 2 years of school|University-level practical activities in bioinformatics benefit voluntary groups of pupils in the last 2 years of school (Barker ''et al.'' 2015)]] | ||
;Health informatics | ;2. Health informatics | ||
:[[Journal:Analyzing huge pathology images with open source software]] | :[[Journal:Analyzing huge pathology images with open source software]] | ||
:[[Journal:Basics of case report form designing in clinical research]] | :[[Journal:Basics of case report form designing in clinical research]] | ||
| Line 37: | Line 37: | ||
:[[Journal:Use of handheld computers in clinical practice: A systematic review]] | :[[Journal:Use of handheld computers in clinical practice: A systematic review]] | ||
:[[Journal:Why health services research needs geoinformatics: Rationale and case example]] | :[[Journal:Why health services research needs geoinformatics: Rationale and case example]] | ||
;Miscellaneous | ;3. Miscellaneous | ||
:[[Journal:Benefits of the community for partners of open source vendors]] | :[[Journal:Benefits of the community for partners of open source vendors]] | ||
:[[Journal:Generalized procedure for screening free software and open-source software applications/Print version]] | :[[Journal:Generalized procedure for screening free software and open-source software applications/Print version]] | ||
:[[Journal:Human–information interaction with complex information for decision-making]] | :[[Journal:Human–information interaction with complex information for decision-making]] | ||
<!--Place all category tags here--> | |||
[[Category:LIMSwiki books compiling open-access journal articles]] | |||
Revision as of 21:57, 28 December 2015
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LIMSjournal: 2015 Edition
This collection of 27 open-access journal articles loaded to LIMSwiki in 2015 is compiled as a convenient, easy-to-access compilation. It is organized alphabetically by topic, with the first author and publication year appearing for your convenience.
- 1. Bioinformatics
- 4273π: Bioinformatics education on low cost ARM hardware (Barker et al. 2013)
- adLIMS: A customized open source software that allows bridging clinical and basic molecular research studies (Calabria et al. 2015)
- iLAP: A workflow-driven software for experimental protocol development, data acquisition and analysis (Stocker et al. 2009)
- Launching genomics into the cloud: Deployment of Mercury, a next generation sequence analysis pipeline (Reid et al. 2014)
- MendeLIMS: A web-based laboratory information management system for clinical genome sequencing (Grimes et al. 2014)
- Personalized Oncology Suite: Integrating next-generation sequencing data and whole-slide bioimages (Dander et al. 2014)
- Requirements for data integration platforms in biomedical research networks: A reference model (Ganzinger et al. 2015)
- SaDA: From sampling to data analysis—An extensible open source infrastructure for rapid, robust and automated management and analysis of modern ecological high-throughput microarray data (Singh et al. 2015)
- SeqWare Query Engine: Storing and searching sequence data in the cloud (O’Connor et al. 2010)
- University-level practical activities in bioinformatics benefit voluntary groups of pupils in the last 2 years of school (Barker et al. 2015)
- 2. Health informatics
- Journal:Analyzing huge pathology images with open source software
- Journal:Basics of case report form designing in clinical research
- Journal:Beyond information retrieval and electronic health record use: Competencies in clinical informatics for medical education
- Journal:Factors associated with adoption of health information technology: A conceptual model based on a systematic review
- Journal:Incorporating domain knowledge in chemical and biomedical named entity recognition with word representations
- Journal:Making big data useful for health care: A summary of the inaugural MIT Critical Data Conference
- Journal:Medical informatics specialty in the developed English-speaking countries: The terminology comparative analysis
- Journal:Return on investment in electronic health records in primary care practices: A mixed-methods study
- Journal:Support patient search on pathology reports with interactive online learning based data extraction
- Journal:The evolution, use, and effects of integrated personal health records: A narrative review
- Journal:Undertaking sociotechnical evaluations of health information technologies
- Journal:Unravelling the tangled taxonomies of health informatics
- Journal:Use of handheld computers in clinical practice: A systematic review
- Journal:Why health services research needs geoinformatics: Rationale and case example
- 3. Miscellaneous
- Journal:Benefits of the community for partners of open source vendors
- Journal:Generalized procedure for screening free software and open-source software applications/Print version
- Journal:Human–information interaction with complex information for decision-making
