Difference between revisions of "Main Page"

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| style="width:66%; vertical-align:top; border:1px solid #aae6ef; background-color: Ivory;-moz-border-radius:10px; border-radius:10px;" rowspan="1"|
| style="width:66%; vertical-align:top; border:1px solid #aae6ef; background-color: Ivory;-moz-border-radius:10px; border-radius:10px;" rowspan="1"|
<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Key commercial laboratory informatics vendors</div>
<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">LIMSwiki books</div>
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What does it mean to be "key" for the purpose of this ranking? The criterion for a vendor selling proprietary commercial laboratory informatics software being listed here: the vendor's LIMSwiki page must have a ''cited'' (from a publicly-available source) price list. Those with demonstration videos are given higher preference; items ranked by number of videos. Go [[:Category:Vendors|here]] for all listed vendors in the wiki.
[[File:Pedia-still-7.jpg|thumb|right|200px|Examples of books printed from Wikipedia]]<br />A '''[[LIMSWiki:Books|LIMSwiki book]]''' is a collection of LIMSwiki articles that can be easily saved to the wiki, rendered electronically in PDF, or ordered as a printed book. Need to know more about LIMSwiki books?
<br />
* [{{fullurl:Special:Book|bookcmd=book_creator}} Create a book] - use the book creator
* [[Help:Books|User help]] – help with using the tool
* [[Help:Books/For experts|Advanced help]] – help with advanced functions
* [[Help:Books/FAQ|FAQ]] – a FAQ regarding the tool
* [[Help:Books/Feedback|Feedback]] – report and track bugs


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1. [[LabLynx, Inc.]]<br />
<!-- Bookshelf -->
2. [[Two Fold Software Limited]]<br />
<h2 style="border:1px solid #AAAAAA; background-color:#aae6ef; padding:0.2em 0; margin:0px; font-size: 110%; font-weight:bold; text-indent:0.5em;">Bookshelf</h2>
3. [[BioData Inc.]]<br />
<div style="border:1px solid #AAAAAA; border-top:0px solid #FFFFFF; background-color:#FFFFFF; margin-bottom:1em; padding:0.8em 0.8em 0.5em 0.8em;">
4. [[Scilligence Corporation]]<br />
{{#tag:inputbox|
5. [[labfolder GmbH]]<br />
type=fulltext
6. [[LabArchives, LLC]]<br />
prefix=Book:
7. [[Research Innovations Limited]]<br />
width=40
8. [[Biomatters Ltd.]]<br />
break=no
9. [[eBioSys Pty. Ltd.]]<br />
searchbuttonlabel=Find a book
10. [[Thermo Scientific]]<br />
}}
11. [[AgileBio]]<br />
<center>'''[[:Category:LIMSwiki books|Browse all {{formatnum:{{#expr: {{formatnum:{{PAGESINCATEGORY:LIMSwiki books (community books)}}|R}} + {{formatnum:{{PAGESINCATEGORY:LIMSwiki books (user books)}}|R}} }}}} LIMSwiki books]]'''.</center><br />
12. [[Mestrelab Research S.L.]]<br />
----
13. [[Autoscribe Ltd.]]<br />
<div style="font-size:90%; text-align:center;">[[:Category:LIMSwiki books (community books)|All {{PAGESINCATEGORY:LIMSwiki books (community books)}} community-maintained books]]{{·}}[[:Category:LIMSwiki books (user books)|All {{PAGESINCATEGORY:LIMSwiki books (user books)}} user-maintained books]]</div>
14. [[LABVANTAGE Solutions, Inc.|LabVantage Solutions, Inc.]]<br />
<!-- end bookshelf -->
15. [[Agilent Technologies, Inc.]]
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16. [[Instrumentos Científicos SA]]<br />
17. [[BiochemLab Solutions]]<br />
18. [[NoteBookMaker, LLC]]<br />
19. [[Sysment Kft.]]<br />
20. [[The Edge Software Consultancy Ltd.]]<br />
21. [[BioSistemika LLC]]<br />
22. [[LABTrack, LLC]]<br />
23. [[Blaze Systems Corporation]]<br />
24. [[ChemWare, Inc.]]<br />
25. [[CloudLIMS.com, LLC]]<br />
26. [[Dynamic Databases, LLC]]<br />
27. [[EZQuant Ltd.]]<br />
28. [[LabWare, Inc.]]<br />
29. [[Laucks Technical Services, LLC]]<br />
30. [[Promium, LLC]]
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31. [[STARLIMS Corporation]]<br />
32. [[ChemBytes]]<br />
33. [[Findings Software SAS]]<br />
34. [[FORMULATOR Software, LLC]]<br />
35. [[Genetic Technologies, Inc.]]<br />
36. [[Margy Tech Pvt. Ltd.]]<br />
37. [[Mountain States Consulting, LLC]]<br />
38. [[Nippon Control System Corporation]]<br />
39. [[Shazino SAS|shazino SAS]]<br />
40. [[SLCLAB Informática SL]]<br />
41. [[SPLhost, Inc.]]<br />
42. [[Summit Research Services]]<br />
43. [[System Approach, Ltd.]]<br />
44. [[Terra Systems OÜ]]
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Additional tools:
Additional tools:
* [[Key laboratory informatics vendors and software]]
* [[:Category:Vendor classes|Classifications of vendors]]
* [[:Category:Vendor classes|Classifications of vendors]]
* [[:Category:LIMS vendors by industry|LIMS vendors by industry]]
* [[:Category:LIMS vendors by industry|LIMS vendors by industry]]
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<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Key cloud- or SaaS-based laboratory informatics software</div>
<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">LIMSwiki journal articles</div>
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Listed below are key commercial and open-source laboratory informatics software offerings listed in the wiki that utilize the cloud or [[software as a service]] (SaaS) model. "Key" indicates vendor's (or software's) LIMSwiki page has a ''cited'' (from a publicly-available source) price list. Those with demonstration videos are given higher preference; items ranked by number of videos.
[[File:Annual volumes of articles in full immediate open access journals - 1741-7015-10-124-2.png|thumb|right|150px|Open-access articles becoming more common]]<br />A '''[[LIMSWiki:Journal articles|LIMSwiki journal article]]''' is a selected open-access article relating to various fields of informatics, free to republish elsewhere with proper citation. You can browse the collection using the tools below. Also note that like other articles found on this wiki, journal articles can be added to [[LIMSWiki:Books|LIMSwiki books]].
 
For a full listing of journals — open-access and otherwise — relating to [[laboratory informatics]], [[bioinformatics]], and other forms of [[informatics]], please see [[LIMSWiki:Resources/Journals]].


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1. [[LabKey Server]] via [[LabKey Corporation]]<br />
2. webLIMS and Health Cloud Hub via [[LabLynx, Inc.]]<br />
3. [[Bika LIMS]] via [[Bika Lab Systems (Pty) Ltd.]]<br />
4. Labguru via [[BioData Inc.]]<br />
5. Scilligence ELN via [[Scilligence Corporation]]<br />
6. labfolder via [[labfolder GmbH]]<br />
7. LabArchives via [[LabArchives, LLC]]<br />
8. eCAT via [[Research Innovations Limited]]<br />
9. Mbook via [[Mestrelab Research S.L.]]<br />
10. LabVantage 7 via [[LABVANTAGE Solutions, Inc.|LabVantage Solutions, Inc.]]<br />
11. NevisLIMS via [[Instrumentos Científicos SA]]<br />
12. NoteBookMaker via [[NoteBookMaker, LLC]]
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13. Sysment Notebook via [[Sysment Kft.]]<br />
14. BioRails DM via [[The Edge Software Consultancy Ltd.]]<br />
15. GENEIO via [[BioSistemika LLC]]<br />
16. LABTrack via [[LABTrack, LLC]]<br />
17. BioTracer via [[CloudLIMS.com, LLC]]<br />
18. limsExpress via [[Dynamic Databases, LLC]]<br />
19. iLIS via [[Margy Tech Pvt. Ltd.]]<br />
20. SimpLabo via [[Nippon Control System Corporation]]<br />
21. Element LIMS via [[Promium, LLC]]<br />
22. Datacloud via [[SPLhost, Inc.]]<br />
23. hivebench via [[Shazino SAS|shazino SAS]]


<!-- Journal collection -->
<h2 style="border:1px solid #AAAAAA; background-color:#aae6ef; padding:0.2em 0; margin:0px; font-size: 110%; font-weight:bold; text-indent:0.5em;">Journal articles</h2>
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{{#tag:inputbox|
type=fulltext
prefix=Journal:
width=40
break=no
searchbuttonlabel=Find a journal article
}}
<center>'''[[:Category:LIMSwiki journal articles|Browse all {{formatnum:{{#expr: {{formatnum:{{PAGESINCATEGORY:LIMSwiki journal articles (all)}}|R}} }}}} journal articles]]'''.</center><br />
----
<div style="font-size:90%; text-align:center;">[[:Category:LIMSwiki journal articles on informatics|All {{PAGESINCATEGORY:LIMSwiki journal articles on informatics}} journal articles about informatics in general]]{{·}}[[:Category:LIMSwiki journal articles on health informatics|All {{PAGESINCATEGORY:LIMSwiki journal articles on health informatics}} journal articles about health informatics]]</div>
<!-- end Collection -->
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<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Open-source software</div>
<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Open-source software</div>
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* [[:Category:Laboratory information management systems (open source)|Open-source LIMS software]]
* [[:Category:Laboratory information management systems (open source)|Open-source LIMS software]]
* [[:Category:Laboratory information systems (open source)|Open-source LIS software]]
* [[:Category:Laboratory information systems (open source)|Open-source LIS software]]
* [[:Category:Scientific data management systems (open source)|Open-source SDMS software]]
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<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Additional LIMSwiki resources</div>
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We've created several resources for users of the wiki over the years, including:
* [[LIMSWiki:Resources|LIMSwiki informatics resource portal]]
* [[LIMSWiki:LIMSforum and LIMS/LI forum posts|LIMSforum and LIMS/LI posts]]
* [[Laboratory, Scientific, and Health Informatics Buyer's Guide]]
* [[Limspec]]
* [[LIMS and laboratory informatics questionnaire]]
* '''NEW''': [[Laboratory information system (LIS) questionnaire]]
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<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Open-source laboratory informatics software</div>
<div style="border-bottom:1px solid #aae6ef; background-color:#aae6ef; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Additional LIMSwiki resources</div>
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Listed below are some of the most active and supported open-source laboratory informatics software projects with articles in the wiki, as of May 2014. Go [[:Category:Laboratory informatics software (open_source)|here]] for all listed open-source laboratory informatics projects.
We've created several resources for users of the wiki over the years, including the [[LIMSWiki:Resources|LIMSwiki informatics resource portal]], which contains among other tools:
# [[LIMSWiki:Resources#Magazines, journals, and blogs|Magazines, journals, and blogs]]
# [[LIMSWiki:Resources#Organizations, not-for-profits, and special interest groups|Organizations, not-for-profits, and special interest groups]]
# [[LIMSWiki:Resources#Conferences and trade shows|Conferences and trade shows]]
# [[LIMSWiki:Resources#Consultants|Consultants]]
# [[LIMSWiki:Resources#Knowledge base, research, and reference|Knowledge base, research, and reference]]


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Additional tools:
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* '''NEW''': [[Laboratory information system (LIS) questionnaire]]
<div style="padding:0.4em 1em 0.3em 1em;">
* [[LIMS and laboratory informatics questionnaire]]
* [[Bika LIMS]] via [[Bika Lab Systems (Pty) Ltd.|Bika Lab Systems]]<br />
* [[Laboratory, Scientific, and Health Informatics Buyer's Guide]]
* [[LabKey Server]] via [[LabKey Corporation]]<br />
* [[LIMSWiki:LIMSforum and LIMS/LI forum posts|Archived LIMSforum posts from LinkedIn]]
* [[Galaxy (biomedical software)|Galaxy]] via Penn State & Emory University<br />
* [[LabTrove]] via University of Southampton<br />
* [[GNomEx]] via Huntsman Cancer Institute<br />
* [[SeqWare]] via its dev team<br />
* [[OSCAR]] via OSCAR EMR<br />
* [[OpenClinica]] via OpenClinica, LLC<br />
* [[eLabFTW]] via its developer Nicolas CARPi<br />
* [[open enventory]] via Technische Universität Kaiserslautern<br />
* [[OpenMRS]] via its dev team<br />
* [[eln]] via its developer Daniel Wagenaar
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* [[openCDMS]] via University of Manchester<br />
* [[GNU Health]] via GNU Solidario<br />
* [[openBIS]] via Center for Information Science and Databases - ETHZ<br />
* [[OpenEMR]] via its dev team<br />
* [[MISO]] via The Genome Analysis Centre<br />
* [[OpenELIS]] via Univ. of Iowa and Univ. of Washington<br />
* [[OpenChrom]] via its dev team<br />
* [[Indigo ELN]] via GGA Software Services, LLC<br />
* [[Krishagni Solutions Pvt. Ltd.|OpenSpecimen]] via Krishagni Solutions<br />
* [[ms-lims]] via Ghent University and VIB
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Revision as of 00:18, 5 November 2015


Welcome to LIMSwiki.org, the laboratory, health, and science informatics encyclopedia.
Users have contributed: 3,164 articles.

LIMSwiki is a collaborative wiki dedicated to the scientific community, featuring organized, documented, and up-to-date content regarding all aspects of laboratory informatics, bioinformatics, and health informatics. LIMSwiki also strives to maintain relevant knowledge about laboratory equipment as well as commercial and open-source software likely to be used in a laboratory setting. This also includes the vendors of such equipment and software.

Like any community wiki, the value and success of LIMSwiki is dependent upon the scientific community contributing their vast knowledge through the creation of relevant articles and editing of existing articles where knowledge is absent. If you wish to enrich the content of this wiki or have something of value to add, please request an account and get started.


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Featured article of the week

Fig1 Soto-Perdomo SoftwareX2023 24.jpg

"OptiGUI DataCollector: A graphical user interface for automating the data collecting process in optical and photonics labs"

OptiGUI DataCollector is a Python 3.8-based graphical user interface (GUI) that facilitates automated data collection in optics and photonics research and development equipment. It provides an intuitive and easy-to-use platform for controlling a wide range of optical instruments, including spectrometers and lasers. OptiGUI DataCollector is a flexible and modular framework that enables simple integration with different types of devices. It simplifies experimental workflow and reduces human error by automating parameter control, data acquisition, and analysis. OptiGUI DataCollector is currently focused on optical mode conversion utilizing fiber optic technologies ... (Full article...)

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LIMSwiki books
Examples of books printed from Wikipedia

A LIMSwiki book is a collection of LIMSwiki articles that can be easily saved to the wiki, rendered electronically in PDF, or ordered as a printed book. Need to know more about LIMSwiki books?



Laboratory informatics software and products
LIMSwiki journal articles
Open-access articles becoming more common

A LIMSwiki journal article is a selected open-access article relating to various fields of informatics, free to republish elsewhere with proper citation. You can browse the collection using the tools below. Also note that like other articles found on this wiki, journal articles can be added to LIMSwiki books.

For a full listing of journals — open-access and otherwise — relating to laboratory informatics, bioinformatics, and other forms of informatics, please see LIMSWiki:Resources/Journals.


Open-source software

Looking for open-source software solutions to make your lab or office more efficient? Try these locations:

Additional LIMSwiki resources

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Additional information
Latest news

June 1, 2024:

WLA icon news.svg
It's been a while. How about a few updates? First, today you'll notice a bit of a refresh of the front page. It was becoming increasingly obvious that for a wiki that's been around for well over a decade, finding something across the various namespaces (i.e., areas) still wasn't easy. A plethora of links were pasted across the front page, but that wasn't enough. This front page update is the first of several steps towards making knowledge and information a bit more findable on the wiki (there's always more that can be done). We now have a mini search portal for our four larger non-encyclopedic areas: guides and white papers, Q&A articles, journal articles, and books. This not only highlights these four areas more prominently but also gives users several ways to search and navigate the content in those areas. Second, a difficult decision was made to scale back vendor content. To the point prior about highlighting this wiki's encyclopedic and non-encyclopedic knowledge repository, it was time to move the vendors from the encyclopedic space to their own namespace, the Vendor: namespace. While vendor content is still highly useful to LIMSWiki users, its no longer as front-facing. Additionally, maintaining feature tables for each vendor was increasingly labor-intensive. As such, feature tables were removed, recognizing at the same time the onus remains fully on vendors to be more transparent about making public the full functionality of their offerings so potential buyers can make more informed decisions. Vendor records still retain their history, highlight offerings (i.e., LIMS, LIS, ELN, SDMS, and CDS), industries served, and other original information. Shawn Douglas (talk) 19:06, 1 June 2024 (UTC)


November 20, 2023:

Fig3 Liscouski SciStudGuideLabInfo23.png
Are you studying some sort of laboratory-based science in university? How well do your classes address laboratory informatics topics, particularly in the scope of industrial labs and how they operate outside of academia? If you find the discussion lacking, then his guide by industry veteran Joe Liscouski will be worth a look. In his guide A Science Student's Guide to Laboratory Informatics, Liscouski presents "an annotated map of the laboratory portion of a technological world, identifying critical points of interest and how they relate to one another, while making recommendations for the reader to learn more." Hope you find it useful! Shawn Douglas (talk) 18:48, 20 November 2023 (UTC)


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