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• Journal:Methods for specifying scientific data standards and modeling relationships with applications to neuroscience
  ...uroscience data format needs to support the management and organization of large collections of data from many modalities and sources such as neurological r ...ming languages and analysis tools, and is optimized for storage and I/O of large-scale scientific data.
  77 KB (11,266 words) - 22:34, 20 February 2017
• Journal:What is the "source" of open-source hardware?
  ...urce hardware? To date there is no simple answer to this question, leaving large room for interpretation in the usage of the term. Based on analysis of publ .../> draws a contrast: compared with OSS development, the aspect of physical object design in OSH has strong impacts on required skills, tools, and infrastruct
  105 KB (14,517 words) - 18:47, 6 October 2021
• Journal:OpenChrom: A cross-platform open source software for the mass spectrometric analysis of chromatographic data
  ...c science]]. Analytical instruments equipped with automated samplers yield large amounts of measurement data, which needs to be verified and analyzed. Since ...omatic samplers enable high throughput analyses. Software assists handling large amounts of data generated by automated and fast operating analytical instru
  43 KB (6,046 words) - 18:58, 11 April 2024
• Journal:Named data networking for genomics data management and integrated workflows
  ...of effectively utilizing these datasets are enormous, as they are not only large in size but also stored in various geographically distributed repositories '''Keywords''': genomics data, genomics workflows, large science data, cloud computing, named data networking
  85 KB (12,769 words) - 19:38, 22 March 2021
• Journal:Design, implementation and operation of a multimodality research imaging informatics repository
  ...imaging research increasingly involves acquiring, managing and processing large amounts of distributed imaging data. Integrated systems that combine data, ...nsures long-term usability, integrity inter-operability and integration of large imaging data. Research users can securely browse and download stored images
  42 KB (6,245 words) - 20:22, 12 January 2016
• Journal:Shared metadata for data-centric materials science
  ...the calculated properties. In this respect, whether an attribute of a data object is data or metadata depends on the context. This simple example also depict ...otice that, whereas in computational materials science the concept of data object identified by a single atomic configuration is well defined, in experimenta
  156 KB (22,332 words) - 16:26, 29 April 2024
• Journal:An open experimental database for exploring inorganic materials
  ...als informatics|materials science]] is limited by the lack of sufficiently large and diverse datasets amenable to data mining. If publicly open, such data r ...rocess automation, natural language processing, and computer vision, where large databases are available to support data-driven modeling efforts. These succ
  56 KB (7,987 words) - 19:53, 16 April 2018
• Journal:Simulation of greenhouse energy use: An application of energy informatics
  ...fruits and vegetables, particularly in China with its rapidly growing and large middle class.<ref name="CEACEA14" /> ...plant details and production schedule) necessary to control the sensitized object (LED lighting). These four additional components illustrate how the core en
  46 KB (6,702 words) - 18:46, 6 October 2021
• LII:Laboratory Technology Planning and Management: The Practice of Laboratory Systems Engineering
  * Analyzing complex data or large volumes of data could be beneficial, e.g., the analysis of radio astronomy
  218 KB (34,907 words) - 16:00, 29 March 2024
• Journal:ChromaWizard: An open-source image analysis software for multicolor fluorescence in situ hybridization analysis
  ...metaphase spreads and on Chinese hamster ovary cell lines, known for their large number of chromosomal rearrangements. The application can be easily adapted ...ion file. The configuration file is a simple text file in JSON (JavaScript Object Notation) format. A JSON editor like [https://jsoneditoronline.org/ JSON Ed
  28 KB (3,997 words) - 19:17, 30 December 2019
• Journal:Handling metadata in a neurophysiology laboratory
  ...e="SchwarzChronic14">{{cite journal |title=Chronic, wireless recordings of large-scale brain activity in freely moving rhesus monkeys |journal=Nature Method ...f a complex behavioral experiment that involves neuronal recordings from a large number of electrodes that yield massively parallel spike and local field po
  88 KB (13,049 words) - 18:41, 22 December 2017
• Journal:Research on information retrieval model based on ontology
  Information retrieval is the process of extracting relevant documents from large data sets. Along with the increasing accumulation of data and the rising de ...ailed description of domain conceptualization which expresses the abstract object, relation, and class in one vocabulary set.<ref name="ValletAnOnt05">{{cite
  36 KB (4,927 words) - 18:44, 6 October 2021
• Journal:Arkheia: Data management and communication for open computational neuroscience
  ...rnal |title=Inferring cortical function in the mouse visual system through large-scale systems neuroscience |journal=Proceedings of the National Academy of ...f>, HRLAnalysis<ref name="ThibeaultAnal14">{{cite journal |title=Analyzing large-scale spiking neural data with HRLAnalysis |journal=Frontiers in Neuroinfor
  61 KB (9,003 words) - 19:16, 3 April 2018
• Journal:An overview of data warehouse and data lake in modern enterprise data management
  ...is not or has not yet been defined.<ref name=":1" /> In detail, DWs store large amounts of data collected by different sources, typically using predefined ...ta processing is aimed at [[data mining]] (i.e., extracting knowledge from large amounts of data), leveraging data management, [[machine learning]] (ML), hi
  130 KB (18,351 words) - 16:15, 3 May 2023
• Journal:Practical approaches for mining frequent patterns in molecular datasets
  ...ndliness of these tools and the complexity of their output, which is often large, static, and consequently hard to interpret. Here, we apply three software ...3">{{cite journal |title=Mining association rules between sets of items in large database |journal=Proceedings of the 1993 ACM SIGMOD International Conferen
  65 KB (8,973 words) - 23:51, 24 August 2016
• Journal:A robust, format-agnostic scientific data transfer framework
  ...anage the explosion in the variety and quantity of data produced by modern large-scale experimental facilities (big data) have led to an increase in the num ...properties" for each olog aspect (that is, a dataname is an OWL functional object property linking two OWL classes). OWL terms for restricting value ranges w
  85 KB (12,243 words) - 18:56, 10 November 2016
• Journal:A metadata-driven approach to data repository design
  ...e with their current metadata schema, in exchange for a persistent digital object identifier. Two examples of data preview are illustrated, including the dem ...he basic object naturally maps to the molecule, since this is the smallest object for which a dataset can be normally be generated and which can usefully be
  42 KB (6,251 words) - 16:31, 29 April 2024
• Journal:SODAR: Managing multiomics study data and metadata
  ...Sample (material)|samples]] with their [[metadata]]. They must manage many large files that are the results of the assays or subsequent computation. Users w ...the iRODS [[Information management|data management]] system, which handles large quantities of files and substantial amounts of data. SODAR also offers prog
  61 KB (8,704 words) - 16:14, 29 March 2024
• Journal:SystemPipeR: NGS workflow and report generation environment
  ...for example by profiling the mRNA, miRNA, and DNA methylation states of a large set of biological samples in parallel.<ref name="HoltTheNew08">{{cite journ ...uctor environment provide a substantial number of widely used tools with a large user base in this area.<ref name="HuberOrch15" /> Thus, a workflow framewor
  46 KB (6,269 words) - 20:15, 27 August 2018
• Journal:Analyzing huge pathology images with open source software
  ...}}</ref><ref name="WienertCog13">{{cite journal |title=CognitionMaster: an object-based image analysis framework |journal=Diagnostic Pathology |author=Wiener ...ed on a single site, one has often to use clusters of computers to achieve large-scale studies of many full-size slides from several patients.<ref name="Kon
  44 KB (6,468 words) - 16:38, 12 January 2016

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