File:Fig2 Reid BMCInformatics2014 15.jpg

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Fig2_Reid_BMCInformatics2014_15.jpg(600 × 514 pixels, file size: 76 KB, MIME type: image/jpeg)

Summary

Description

Figure 2. Workflow monitoring in DNAnexus. The GUI for applet monitoring displays the progress as a Gantt chart. The left panel lists the various steps including the parallelization steps with each row corresponding to a compute instance. A particular step can be clicked to determine the exact inputs and output or logs of execution for that step. Here we show a snapshot of the webpage displaying the progress of execution for the NA12878 exome analysis.

Source

Reid, Jeffrey G.; Carroll, Andrew; Veeraraghavan, Narayanan; Dahdouli, Mahmoud; Sundquist, Andreas; English, Adam; Bainbridge, Matthew; White, Simon; Salerno, William; Buhay, Christian; Yu, Fuli; Muzny, Donna; Daly, Richard; Duyk, Geoff; Gibbs, Richard A. Boerwinkle, Eric (2014). "Launching genomics into the cloud: Deployment of Mercury, a next generation sequence analysis pipeline". BMC Bioinformatics 15: 30. doi:10.1186/1471-2105-15-30. ISSN 1471-2105. http://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-15-30. 

Date

2014

Author

Reid, Jeffrey G.; Carroll, Andrew; Veeraraghavan, Narayanan; Dahdouli, Mahmoud; Sundquist, Andreas; English, Adam; Bainbridge, Matthew; White, Simon; Salerno, William; Buhay, Christian; Yu, Fuli; Muzny, Donna; Daly, Richard; Duyk, Geoff; Gibbs, Richard A. Boerwinkle, Eric

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Creative Commons Attribution 2.0 Generic

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current18:35, 18 December 2015Thumbnail for version as of 18:35, 18 December 2015600 × 514 (76 KB)Shawndouglas (talk | contribs)