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Revision as of 21:07, 22 February 2012



Welcome to LIMSwiki.
The free laboratory informatics encyclopedia that anyone can edit.
Users have contributed: 3,164 articles.

Getting Started

If you're new to editing a wiki, the best place to start learning editing syntax is the Basic Text Formatting help file.
 
Below are some links to introduce you to LIMSwiki:

Latest Updates and News

February 22, 2012:

Thankfully data storage and analysis in the lab has gotten easier.
Yes, this wiki is still alive! It's strange to think it's been almost a year since it was introduced. Since then those with the time to spare have added a wide variety of infrastructure and some content. It has been a slow process, however, and like any major wiki project, more knowledgeable and dedicated editors are needed.

So what has been going on with the wiki? The initial focus was to get some of the major concepts like laboratory information management system (LIMS) and electronic laboratory notebook (ELN) documented at least up to a decent state of quality, with room for article improvement later on. Then a fair amount of effort went into documenting just who is selling LIMS, LIS, ELN, and CDMS. More infrastructure went into place for categories, and a method was put in place for vendors to include a knowledge base on the wiki. Most recently work has been done to track the features LIMS vendors publicly advertise for their LIMS and document them on each vendor page. That work — along with work detailing what each piece of LIMS functionality generally does — is still in progress.

As for the future, we hope to build a critical mass of people willing to help research, write, and cite information about all things laboratory informatics. The need for storing laboratory data, analyzing samples, and improving workflow will only become greater, and with that need comes a demand for clear and referenced information about laboratory data management and the laboratories that require it.

That's where you, the reader, come in. If you have knowledge of anything laboratory related and can contribute, please request an account. Thanks!

Best,

Shawn Douglas 15:57, 22 February 2012 (EST)


Previous Updates and News

May 22, 2011:

Genomics is only one branch of science that heavily depends on laboratory informatics.
While researching modern vendors of laboratory informatics software, I stumbled across a post by LABVANTAGE's Terry Smallmon from earlier this month. In it he rightfully points out that while the nomenclature of laboratory informatics has historically had distinct subdivisions such as LIMS, ELN, and CDS, times are changing. The lines that differentiate a LIMS from a SDMS, for example, have blurred significantly, almost to the point where the nomenclature is losing its meaning in some cases. Smallmon also notes that as vendors take a more modular approach to laboratory informatics, the distinctions fade even more. Finally he points out that at least for him, determining what a potential customer needs shouldn't be based on nomenclature alone, but rather on the problem(s) a customer is trying to solve.

From my limited perspective, I can't disagree with Smallmon's observations. In fact, the blurred definition of laboratory informatics solutions is referenced in several cases among the major articles. However, I feel it important to emphasize that while definitions of these solutions may be blurring, a rough majority of vendors seem to continue using the nomenclature to describe their offerings. While I can understand the trepidation and skepticism behind trying to more appropriately define the industry nomenclature, the endeavor still seems a worthy one. Sure, we'll never have full agreement on the definition of any one term; however, by making the effort to coalesce the history of laboratory informatics, the industry should in theory have more cohesion.

As an outsider looking in, I perceive this to be a desirable goal. Laboratory informatics is an increasingly vital component of laboratories and scientific research. I recently was told a story from a programmer friend who works in genomics. He related that from his viewpoint, there's an increasingly large bottleneck between the amount of data being created in genomics labs and how it's stored and processed. This really struck home for me. As technology allows for better data collection, so should it allow for better storage and processing. And laboratory informatics is at the center of all of this. Faster and more efficient systems will be needed, and regardless of nomenclature, these solutions will solve problems.

That said, collecting the history and relevant information surrounding the field can only help unify the effort to create better solutions. The names and definitions of those solutions may change with time, but it doesn't mean we shouldn't make the effort. Just as we document the never-ending changes of language in dictionaries, so should we document the changes of the laboratory informatics industry. It's poised to play an important role in humanity's advancement.

Best,

Shawn Douglas 18:43, 22 May 2011 (EDT)