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==Summary== | |||
{{Information | |||
|Description='''Figure 1.''' Major categories of metadata. The metadata captured for ENCODE can be grouped into the following major areas: biosamples and donors/strains (formerly ‘cell types’), libraries, antibodies, data files and pipelines and software. These categories are then grouped into an experiment with replicates. Only a subset of metadata is listed in the figure to provide an overview of the breadth and depth of metadata collected for an assay. The full set of metadata can be viewed at https://github.com/ENCODE-DCC/encoded/tree/master/src/encoded/schemas. | |||
|Source={{cite journal |title=Principles of metadata organization at the ENCODE data coordination center |journal=Database |author=Hong, Eurie L.; Sloan, Cricket A.; Chan, Esther T.; Davidson, Jean M.; Malladi, Venkat S.; Strattan, J. Seth; Hitz, Benjamin C.; Gabdank, Idan; Narayanan, Aditi K.; Ho, Marcus; Lee, Brian T.; Rowe, Laurence D.; Dreszer, Timothy R.; Roe, Greg R.; Podduturi, Nikhil R.; Tanaka, Forrest; Hilton, Jason A.; Cherry, J. Michael |volume=2016 |pages=baw001 |year=2016 |doi=10.1093/database/baw001 |pmid=26980513 |pmc=PMC4792520}} | |||
|Author=Hong, Eurie L.; Sloan, Cricket A.; Chan, Esther T.; Davidson, Jean M.; Malladi, Venkat S.; Strattan, J. Seth; Hitz, Benjamin C.; Gabdank, Idan; Narayanan, Aditi K.; Ho, Marcus; Lee, Brian T.; Rowe, Laurence D.; Dreszer, Timothy R.; Roe, Greg R.; Podduturi, Nikhil R.; Tanaka, Forrest; Hilton, Jason A.; Cherry, J. Michael | |||
|Date=2016 | |||
|Permission=[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] | |||
}} | |||
== Licensing == | == Licensing == | ||
{{cc-by-4.0}} | {{cc-by-4.0}} |
Latest revision as of 20:55, 6 September 2016
Summary
Description |
Figure 1. Major categories of metadata. The metadata captured for ENCODE can be grouped into the following major areas: biosamples and donors/strains (formerly ‘cell types’), libraries, antibodies, data files and pipelines and software. These categories are then grouped into an experiment with replicates. Only a subset of metadata is listed in the figure to provide an overview of the breadth and depth of metadata collected for an assay. The full set of metadata can be viewed at https://github.com/ENCODE-DCC/encoded/tree/master/src/encoded/schemas. |
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Source |
Hong, Eurie L.; Sloan, Cricket A.; Chan, Esther T.; Davidson, Jean M.; Malladi, Venkat S.; Strattan, J. Seth; Hitz, Benjamin C.; Gabdank, Idan; Narayanan, Aditi K.; Ho, Marcus; Lee, Brian T.; Rowe, Laurence D.; Dreszer, Timothy R.; Roe, Greg R.; Podduturi, Nikhil R.; Tanaka, Forrest; Hilton, Jason A.; Cherry, J. Michael (2016). "Principles of metadata organization at the ENCODE data coordination center". Database 2016: baw001. doi:10.1093/database/baw001. PMC PMC4792520. PMID 26980513. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4792520. |
Date |
2016 |
Author |
Hong, Eurie L.; Sloan, Cricket A.; Chan, Esther T.; Davidson, Jean M.; Malladi, Venkat S.; Strattan, J. Seth; Hitz, Benjamin C.; Gabdank, Idan; Narayanan, Aditi K.; Ho, Marcus; Lee, Brian T.; Rowe, Laurence D.; Dreszer, Timothy R.; Roe, Greg R.; Podduturi, Nikhil R.; Tanaka, Forrest; Hilton, Jason A.; Cherry, J. Michael |
Permission (Reusing this file) |
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This work is licensed under the Creative Commons Attribution 4.0 License. |
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