Difference between revisions of "File:Fig3 Hatakeyama BMCBioinformatics2016 17.gif"
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==Summary== | |||
{{Information | |||
|Description='''Figure 3.''' The screenshots of DataSet list and a part of a result generated by the edgeR SUSHI application. '''a.''' The DataSets are listed with a tree view (top) and table view (bottom). In the tree view, each node indicates a DataSet and the parental node indicates the input DataSet for the child node. '''b.''' Visualizations form the differential expression result the edgeR SUSHI application. We show a scatter plot with significantly differential expressed genes red-colored (left) and clustered heatmap (right). All calculated data is downloadable from this view. | |||
|Source={{cite journal |title=SUSHI: An exquisite recipe for fully documented, reproducible and reusable NGS data analysis |journal=BMC Bioinformatics |author=Hatakeyama, M.; Opitz, L.; Russo, G.; Qi, W.; Schlapbach, R.; Rehrauer, H. |volume=17 |pages=228 |year=2016 |doi=10.1186/s12859-016-1104-8}} | |||
|Author=Hatakeyama, M.; Opitz, L.; Russo, G.; Qi, W.; Schlapbach, R.; Rehrauer, H. | |||
|Date=2016 | |||
|Permission=[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] | |||
}} | |||
== Licensing == | == Licensing == | ||
{{cc-by-4.0}} | {{cc-by-4.0}} | ||
Latest revision as of 15:16, 6 July 2016
Summary
| Description |
Figure 3. The screenshots of DataSet list and a part of a result generated by the edgeR SUSHI application. a. The DataSets are listed with a tree view (top) and table view (bottom). In the tree view, each node indicates a DataSet and the parental node indicates the input DataSet for the child node. b. Visualizations form the differential expression result the edgeR SUSHI application. We show a scatter plot with significantly differential expressed genes red-colored (left) and clustered heatmap (right). All calculated data is downloadable from this view. |
|---|---|
| Source |
Hatakeyama, M.; Opitz, L.; Russo, G.; Qi, W.; Schlapbach, R.; Rehrauer, H. (2016). "SUSHI: An exquisite recipe for fully documented, reproducible and reusable NGS data analysis". BMC Bioinformatics 17: 228. doi:10.1186/s12859-016-1104-8. |
| Date |
2016 |
| Author |
Hatakeyama, M.; Opitz, L.; Russo, G.; Qi, W.; Schlapbach, R.; Rehrauer, H. |
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This work is licensed under the Creative Commons Attribution 4.0 License. |
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