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<div style="font-size:162%; border:none; margin:0; padding:0em; color:#000;">Welcome to [[LIMS_Wiki_Mission|LIMS Wiki]],</div>
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<div style="top:+0.2em; font-size:105%;">the free [[Laboratory_informatics|laboratory informatics]] encyclopedia that [[Help:Contents|anyone&nbsp;can&nbsp;edit]].</div>
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<div id="articlecount" style="font-size:85%;">Users have contributed: [[Special:Statistics|{{NUMBEROFARTICLES}}]] articles</div><br>
<div style="border-bottom:1px solid #abd5f5; background-color:#59b2db; padding:0.5em 0.5em 0.5em 0.5em; font-size:172%; -moz-border-radius:10px 10px 0 0;  border-radius:10px 10px 0 0;">Welcome to [[LIMSwiki_mission|LIMSwiki.org]], <span style="top:+0.2em; font-size:72%;">the [[Laboratory informatics|laboratory]], [[Health informatics|health]], and science [[informatics]] encyclopedia and knowledge repository.</span>
<div id="articlecount" style="font-size:50%;">[[Special:ListUsers|Users]] have contributed: [[Special:Statistics|{{NUMBEROFARTICLES}}]] articles.</div>
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'''LIMSwiki''' is a [[MediaWiki]]-based platform dedicated to the scientific community, featuring organized, cited, up-to-date content regarding all aspects of [[laboratory informatics]], [[bioinformatics]], [[health informatics]], and other types of [[informatics]], as well as other technological, regulatory, and standardization topics relating to the laboratory. LIMSwiki also strives to maintain relevant knowledge about a variety of laboratory systems, including commercial and [[:Category:Open-source software|open-source]] software likely to be used in a [[laboratory]] setting. This includes many of the known [[:Category:Vendors|vendors]] of such software.</div>
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Get started</div>
<div style="padding:0.4em 1em 0.3em 1em;">
<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:Ambox blue question.svg|40px]]</div>
Need help getting started with LIMSwiki? Have no fear! Here are some excellent starting points:<br />&nbsp;<br />
 
*[[LIMSwiki mission|This wiki's mission]]
*[[Special:Search|Search this wiki]]
*[[LIMSWiki:Glossary|Browse the encyclopedic content]]
*[[#KnowledgeRepository|Peruse the knowledge repository]]
<br />
LIMSwiki and MediaWiki help:
 
*[[:Category:LIMSwiki help documentation|LIMSwiki help documentation]]
*[[Help:MediaWiki basics|LIMSwiki training guides]]
*[[Help:Formatting|Wikitext formatting help and examples]]
*[[Main_Page/news#April_18.2C_2011:|LIMSwiki naming conventions for article titles]]
*[[Help:Using the Internet Archive|Using and citing the Internet Archive]]
*[http://meta.wikimedia.org/wiki/Help:Contents_User's_Guide MediaWiki user's guide]
 
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Featured article of the week</div>
<div style="padding:0.4em 1em 0.3em 1em;"><br />
{{Article of the week}}
<div align="center">'''[[Main Page/Featured article of the week/2024|— See more archived featured articles —]]'''</div>
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">LIMSwiki research and knowledge repository</div>
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Outside the wiki's [[LIMSWiki:Glossary|encyclopedic content]], more than a decade's worth of guides and white papers, question and answer (Q&A) articles, journal articles, and books can be found. Use the search portals and links below to search through and navigate this extensive content. You may also find links to this wiki's more popular guides in the left-hand navigation of the site.<br />
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<!-- Guides and white papers -->
<br />
<h2 style="border:1px solid #AAAAAA; background-color:#aae6ef; padding:0.2em 0; margin:0px; font-size: 110%; font-weight:bold; text-indent:0.5em;">Guides, white papers, and more</h2>
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<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:Learn.png|60px]]</div><br />A '''LIMSwiki guide or white paper''' is a topical, cited work researched, written, and edited to meet a certain standard of rigor. The topics of these guides and white papers have been chosen over the years to address both contemporary and long-time themes in [[Laboratory informatics|laboratory]] and scientific informatics, as well as technologically adjacent themes like [[cloud computing]] and [[cybersecurity]]. (Note that in the ''LII:'' namespace where these are found, once can also find other "launch" pages for material such as recorded webinars, EdX courses, and other industry works.)<br />&nbsp;<br />
<inputbox>
type=search
namespaces=LII
searchbuttonlabel=Find a guide, white paper, or other object
inline=true
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<center>'''[[:Category:LII:Guides, white papers, and other publications|Browse all {{formatnum:{{#expr: {{formatnum:{{PAGESINCATEGORY:LII:Guides, white papers, and other publications}}|R}}}}}} LIMSwiki guides and white papers]]'''.</center>
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<h2 style="border:1px solid #AAAAAA; background-color:#aae6ef; padding:0.2em 0; margin:0px; font-size: 110%; font-weight:bold; text-indent:0.5em;">LIMS Q&A articles</h2>
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<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:QandAIcon.png|60px]]</div><br />A '''LIMSwiki Q&A article''' is a brief topical article that is researched, written, and edited to answer a specific question, with necessary citations. The questions asked in these articles usually relate to specific industries that depend on laboratories, the [[laboratory informatics]] applications used in those industries, or some other laboratory/informatics-adjacent topic such as [[ISO/IEC 17025]]. A loose limit of 1,200 to 1,400 words is strived for, but sometimes they may go significantly longer in order to best answer the question.<br />&nbsp;<br />
<inputbox>
type=search
namespaces=LIMS_Q&A
searchbuttonlabel=Find a Q&A article
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break=no
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<center>'''[[:Category:LIMS Q&A articles|Browse all {{formatnum:{{#expr: {{formatnum:{{PAGESINCATEGORY:LIMS Q&A articles (all)}}|R}}}}}} LIMSwiki Q&A articles]]'''.</center>
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<!-- Journal collection -->
<h2 style="border:1px solid #AAAAAA; background-color:#aae6ef; padding:0.2em 0; margin:0px; font-size: 110%; font-weight:bold; text-indent:0.5em;">Journal articles</h2>
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<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:WikiJournal of Science logo (flat blue).svg.png|60px]]</div><br />A '''LIMSwiki journal article''' is a selected open-access article relating to various fields of informatics, laboratory management, and data management, free to republish elsewhere with proper citation. You can browse the collection using the tools below. (For a full listing of journals—open-access and otherwise—relating to [[laboratory informatics]], [[bioinformatics]], and other forms of [[informatics]], please see [[LIMSWiki:Resources/Journals]].)<br />&nbsp;<br />
<inputbox>
type=search
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<center>'''[[:Category:LIMSwiki journal articles|Browse all {{formatnum:{{#expr: {{formatnum:{{PAGESINCATEGORY:LIMSwiki journal articles (all)}}|R}} }}}} journal articles]]'''.</center><br />
----
<div style="font-size:90%; text-align:center;">[[:Category:LIMSwiki journal articles on informatics|All {{PAGESINCATEGORY:LIMSwiki journal articles on laboratory informatics}} journal articles about laboratory informatics]]{{·}}[[:Category:LIMSwiki journal articles on health informatics|All {{PAGESINCATEGORY:LIMSwiki journal articles on health informatics}} journal articles about health informatics]]</div></div>
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<h2 style="border:1px solid #AAAAAA; background-color:#aae6ef; padding:0.2em 0; margin:0px; font-size: 110%; font-weight:bold; text-indent:0.5em;">Books</h2>
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<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:National Library Symbol.svg|60px]]</div><br />A '''LIMSwiki book''' is a special rendered collection of articles across various namespaces in LIMSwiki. It may come in the form of a curated list of encyclopedic articles on a given topic, a special collection of journal articles in the ''Journal:'' namespace, or it may be a collection of all the pages of a given white paper or guide in the ''LII:'' namespace (which can then be exported to other sites, like LIMSforum).<br />&nbsp;<br />
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<center>'''[[:Category:LIMSwiki books (community books)|Browse all {{formatnum:{{#expr: {{formatnum:{{PAGESINCATEGORY:LIMSwiki books (community books)}}|R}}}}}} LIMSwiki books]]'''.</center>
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<!--        HEADER        -->
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Laboratory informatics software and products</div>
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Are you looking for [[Laboratory information management system|LIMS]] software? An [[electronic laboratory notebook|ELN]]? Former vendors? Try these suggestions:<br /><br />
! style="padding:2px;" |<h2 style="margin:3px; background:#cedff2; font-size:120%; font-weight:bold; border:1px solid #a3b0bf; text-align:left; color:#180360; padding:0.2em 0.4em;">Getting Started</h2>
 
|-
*[[Vendor:LIMS vendor|Active LIMS vendors]]
| <div style="top:+0.2em; font-size:105%; padding:10px;">
*[[Vendor:LIS vendor|Active LIS vendors]]
If you're new to editing a wiki, the best place to start learning editing syntax is the [[Help:Contents|Basic Text Formatting]] help file. <br>&nbsp;<br>Below are some links to introduce you to LIMS Wiki:
*[[Vendor:ELN vendor|Active ELN vendors]]
* [[LIMS Wiki Mission]]
*[[Vendor:SDMS vendor|Active SDMS vendors]]
* [[Add and Change Requests]]
*[[Vendor:CDS vendor|Active CDS vendors]]
* [[Special:AllPages|Glossary of All Pages]]
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* [http://meta.wikimedia.org/wiki/Help:Contents_User's_Guide A Wiki User's Guide]
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* [http://www.mediawiki.org/wiki/Help:FAQ MediaWiki FAQ]
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searchbuttonlabel=Find a vendor
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Additional tools:
|-
*[[:Category:LIMS vendors by industry|LIMS vendors by industry]]
! style="padding:2px;" | <h2 style="margin:3px; background:#cedff2; font-size:120%; font-weight:bold; border:1px solid #a3b0bf; text-align:left; color:#180360; padding:0.2em 0.4em;">Latest Updates and News</h2>
*[[:Category:LIS vendors by industry|LIS vendors by industry]]
|-
*[[:Category:ELN vendors by industry|ELN vendors by industry]]
| <h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">April 18, 2011:</h2>
*[[Vendor:Key laboratory informatics vendors and software|Laboratory informatics vendors w/ public pricing]]
|-
*[[Vendor:Inactive vendor|Inactive informatics software vendors]]
| <div style="top:+0.2em; font-size:105%; padding:10px;">
For future reference, article titles with words should only have the first word capitalized unless there's a proper name included. I'm occasionally guilty of forgetting the naming conventions for wiki article titles also, so don't feel bad. Here are the naming conventions, listed from Wikipedia:


* '''Use lower case, except for proper names:''' The initial letter of a title is almost always capitalized; subsequent words in a title are not, unless they are part of a proper name, and so  would be capitalized in running text; when this is done, the title will be simple to link to in other articles: ''Northwestern University'' offers more graduate work than a typical ''liberal arts college''. For initial lower case letters, as in eBay, see the technical restrictions page. See also the special rules on capitalization in bird naming.
</div>
* '''To italicize a title, add the template <nowiki>{{italic title}}</nowiki> near the top of the article:''' Use of italics should conform to [[WP:ITALICS]].
* '''Use the singular form:''' Article titles are generally singular in form, e.g. Horse, not Horses. Exceptions include nouns that are always in a plural form in English (e.g. scissors or trousers) and the names of classes of objects (e.g. Arabic numerals or Bantu languages).
* '''Avoid abbreviations:''' Abbreviations and acronyms are generally avoided unless the subject is almost exclusively known by its abbreviation (e.g. NATO and Laser). The abbreviation ''UK'', for United Kingdom, is acceptable for use in disambiguation.  It is also unnecessary to include an acronym in addition to the name in a title.
* '''Avoid definite and indefinite articles:''' Do not place definite or indefinite articles (''the'', ''a'' and ''an'') at the beginning of titles unless they are part of a proper name (e.g. ''The Old Man and the Sea'') or will otherwise change the meaning (e.g. The Crown).
* '''Use nouns:''' Titles should be nouns or noun phrases. Adjective and verb forms (e.g. democratic, integrate) should redirect to articles titled with the corresponding noun (Democracy]], Integration), although sometimes they will be disambiguation pages, as at Organic. Sometimes the noun corresponding to a verb will be the gerund (''-ing'' form), as in Swimming.
* '''Do not enclose titles in quotes:''' Article titles which are quotes (or song titles, etc.) are not enclosed in quotation marks (e.g. ''To be, or not to be'' is the article title, while [["To be, or not to be"]] is a redirect to that article).
*'''Do not use titles suggesting that one article forms part of another:''' Even if an article is considered subsidiary to another (as where summary style is used), it should be named independently. For example, an article on transportation in Azerbaijan should not be given a name like "Azerbaijan/Transportation" or "Azerbaijan&nbsp;(transportation)" – use Transportation in Azerbaijan. (This does not always apply in non-article namespaces: see [[Help:Subpage]].)


Source: http://en.wikipedia.org/wiki/Wikipedia:Naming_conventions
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-Shawn
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| </div>
<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Open-source software</div>
|-
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| <h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">April 15, 2011:</h2>
<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:OpenSource.jpg|50px]]</div>
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Looking for open-source software solutions to make your lab or office more efficient? Try these starting points:
| <div style="top:+0.2em; font-size:105%; padding:10px;">
 
We're just now beginning the process of sprucing up the wiki a bit. We primarily want to get the interface set up and consistent, especially on the front page. It'll be a slow and gradual process. Today I set up a wiki page that can be used for users to suggest terms, definitions, and research that need to be added to the wiki. Simply click the "Add and Change Requests" link in the "Getting Started" section above to learn how to add your requests. Stay tuned for more!
<br />
 
*[[:Category:Open-source software|All open-source software options, by category]]
*[[:Category:Laboratory information management systems (open source)|Open-source LIMS software]]
*[[:Category:Laboratory information systems (open source)|Open-source LIS software]]
*[[:Category:Electronic laboratory notebooks (open source)|Open-source ELN software]]
*[[:Category:Scientific data management systems (open source)|Open-source SDMS software]]
*[[:Category:Enterprise management software (open source)|Open-source enterprise management software]]
*[[:Category:Reporting software (open source)|Open-source reporting software]]
</div>
 
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| rowspan="1" style="width:30%; vertical-align:top; border:1px solid #aae6ef; background-color: #eefcfd;-moz-border-radius:10px; border-radius:10px;" |
<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Additional LIMSwiki resources</div>
<div style="padding:0.4em 1em 0.3em 1em;">
<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:640px-Key symbol blue.png|50px]]</div><br />
We've created several resources for users of the wiki over the years, including the [[LIMSWiki:Resources|LIMSwiki informatics resource portal]], which contains among other tools:
 
#[[LIMSWiki:Resources#Magazines, journals, and blogs|Magazines, journals, and blogs]]
#[[LIMSWiki:Resources#Organizations, not-for-profits, and special interest groups|Organizations, not-for-profits, and special interest groups]]
#[[LIMSWiki:Resources#Conferences and trade shows|Conferences and trade shows]]
#[[LIMSWiki:Resources/Consultants|Consultants]]
#[[LIMSWiki:Resources#Knowledge base, research, and reference|Knowledge base, research, and reference]]
#[[LIMSWiki:Resources#Educational programs, training, and certifications|Educational programs, training, and certifications]]
 
<!--//[[File:New-label-overlay.jpg|left|35px]]These resources have received a thorough refresh as of July 2021.{{clear}}//-->
 
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<div style="border-bottom:1px solid #abd5f5; background-color:#59b2db; padding:0.2em 0.5em 0.2em 0.5em; font-size:130%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Additional information</div>
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-Shawn
<!--        Bottom info sections - inner wrappers    -->
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{| cellspacing="0" cellpadding="0" style="margin:0em 0em 1em 0em; margin-left:auto; margin-right:auto; width:98%"
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| style="width:96%; vertical-align:top; border:1px solid #abd5f5; background-color:#fafafa;-moz-border-radius:10px; border-radius:10px;" |
<div style="border-bottom:1px solid #abd5f5; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Latest news</div>
<div style="padding:0.4em 1em 0.3em 1em;"><br />
{{Latest news}}
<div align="center">[[Main Page/news|— Read more archived news —]]</div>
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Latest revision as of 16:36, 1 June 2024



Welcome to LIMSwiki.org, the laboratory, health, and science informatics encyclopedia and knowledge repository.
Users have contributed: 3,164 articles.
LIMSwiki is a MediaWiki-based platform dedicated to the scientific community, featuring organized, cited, up-to-date content regarding all aspects of laboratory informatics, bioinformatics, health informatics, and other types of informatics, as well as other technological, regulatory, and standardization topics relating to the laboratory. LIMSwiki also strives to maintain relevant knowledge about a variety of laboratory systems, including commercial and open-source software likely to be used in a laboratory setting. This includes many of the known vendors of such software.


Get started
Featured article of the week

Fig1 Soto-Perdomo SoftwareX2023 24.jpg

"OptiGUI DataCollector: A graphical user interface for automating the data collecting process in optical and photonics labs"

OptiGUI DataCollector is a Python 3.8-based graphical user interface (GUI) that facilitates automated data collection in optics and photonics research and development equipment. It provides an intuitive and easy-to-use platform for controlling a wide range of optical instruments, including spectrometers and lasers. OptiGUI DataCollector is a flexible and modular framework that enables simple integration with different types of devices. It simplifies experimental workflow and reduces human error by automating parameter control, data acquisition, and analysis. OptiGUI DataCollector is currently focused on optical mode conversion utilizing fiber optic technologies ... (Full article...)

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LIMSwiki research and knowledge repository

Outside the wiki's encyclopedic content, more than a decade's worth of guides and white papers, question and answer (Q&A) articles, journal articles, and books can be found. Use the search portals and links below to search through and navigate this extensive content. You may also find links to this wiki's more popular guides in the left-hand navigation of the site.


Guides, white papers, and more

Learn.png

A LIMSwiki guide or white paper is a topical, cited work researched, written, and edited to meet a certain standard of rigor. The topics of these guides and white papers have been chosen over the years to address both contemporary and long-time themes in laboratory and scientific informatics, as well as technologically adjacent themes like cloud computing and cybersecurity. (Note that in the LII: namespace where these are found, once can also find other "launch" pages for material such as recorded webinars, EdX courses, and other industry works.)
 
Browse all 44 LIMSwiki guides and white papers.

LIMS Q&A articles

QandAIcon.png

A LIMSwiki Q&A article is a brief topical article that is researched, written, and edited to answer a specific question, with necessary citations. The questions asked in these articles usually relate to specific industries that depend on laboratories, the laboratory informatics applications used in those industries, or some other laboratory/informatics-adjacent topic such as ISO/IEC 17025. A loose limit of 1,200 to 1,400 words is strived for, but sometimes they may go significantly longer in order to best answer the question.
 
Browse all 34 LIMSwiki Q&A articles.

Journal articles

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A LIMSwiki journal article is a selected open-access article relating to various fields of informatics, laboratory management, and data management, free to republish elsewhere with proper citation. You can browse the collection using the tools below. (For a full listing of journals—open-access and otherwise—relating to laboratory informatics, bioinformatics, and other forms of informatics, please see LIMSWiki:Resources/Journals.)
 
Browse all 460 journal articles.


Books

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A LIMSwiki book is a special rendered collection of articles across various namespaces in LIMSwiki. It may come in the form of a curated list of encyclopedic articles on a given topic, a special collection of journal articles in the Journal: namespace, or it may be a collection of all the pages of a given white paper or guide in the LII: namespace (which can then be exported to other sites, like LIMSforum).
 
Browse all 71 LIMSwiki books.


Laboratory informatics software and products
Open-source software
Additional LIMSwiki resources


Additional information
Latest news

June 1, 2024:

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It's been a while. How about a few updates? First, today you'll notice a bit of a refresh of the front page. It was becoming increasingly obvious that for a wiki that's been around for well over a decade, finding something across the various namespaces (i.e., areas) still wasn't easy. A plethora of links were pasted across the front page, but that wasn't enough. This front page update is the first of several steps towards making knowledge and information a bit more findable on the wiki (there's always more that can be done). We now have a mini search portal for our four larger non-encyclopedic areas: guides and white papers, Q&A articles, journal articles, and books. This not only highlights these four areas more prominently but also gives users several ways to search and navigate the content in those areas. Second, a difficult decision was made to scale back vendor content. To the point prior about highlighting this wiki's encyclopedic and non-encyclopedic knowledge repository, it was time to move the vendors from the encyclopedic space to their own namespace, the Vendor: namespace. While vendor content is still highly useful to LIMSWiki users, its no longer as front-facing. Additionally, maintaining feature tables for each vendor was increasingly labor-intensive. As such, feature tables were removed, recognizing at the same time the onus remains fully on vendors to be more transparent about making public the full functionality of their offerings so potential buyers can make more informed decisions. Vendor records still retain their history, highlight offerings (i.e., LIMS, LIS, ELN, SDMS, and CDS), industries served, and other original information. Shawn Douglas (talk) 19:06, 1 June 2024 (UTC)


November 20, 2023:

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Are you studying some sort of laboratory-based science in university? How well do your classes address laboratory informatics topics, particularly in the scope of industrial labs and how they operate outside of academia? If you find the discussion lacking, then his guide by industry veteran Joe Liscouski will be worth a look. In his guide A Science Student's Guide to Laboratory Informatics, Liscouski presents "an annotated map of the laboratory portion of a technological world, identifying critical points of interest and how they relate to one another, while making recommendations for the reader to learn more." Hope you find it useful! Shawn Douglas (talk) 18:48, 20 November 2023 (UTC)