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<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Tsur BioDataMining2017 10.gif|240px]]</div>
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Niszczota EconBusRev23 9-2.png|240px]]</div>
'''"[[Journal:Rapid development of entity-based data models for bioinformatics with persistence object-oriented design and structured interfaces|Rapid development of entity-based data models for bioinformatics with persistence object-oriented design and structured interfaces]]"'''
'''"[[Journal:Judgements of research co-created by generative AI: Experimental evidence|Judgements of research co-created by generative AI: Experimental evidence]]"'''


Databases are imperative for research in [[bioinformatics]] and computational biology. Current challenges in database design include data heterogeneity and context-dependent interconnections between data entities. These challenges drove the development of unified data interfaces and specialized databases. The curation of specialized databases is an ever-growing challenge due to the introduction of new data sources and the emergence of new relational connections between established datasets. Here, an open-source framework for the curation of specialized databases is proposed. The framework supports user-designed models of data encapsulation, object persistence and structured interfaces to local and external data sources such as MalaCards, Biomodels and the National Center for Biotechnology Information (NCBI) databases. The proposed framework was implemented using Java as the development environment, EclipseLink as the data persistence agent and Apache Derby as the database manager. Syntactic analysis was based on J3D, jsoup, Apache Commons and w3c.dom open libraries. Finally, a construction of a specialized database for aneurysm-associated vascular diseases is demonstrated. This database contains three-dimensional geometries of aneurysms, patients' clinical information, articles, biological models, related diseases and our recently published model of aneurysms’ risk of rapture. The framework is available at: http://nbel-lab.com. ('''[[Journal:Rapid development of entity-based data models for bioinformatics with persistence object-oriented design and structured interfaces|Full article...]]''')<br />
The introduction of [[ChatGPT]] has fuelled a public debate on the appropriateness of using generative [[artificial intelligence]] (AI) ([[large language model]]s or LLMs) in work, including a debate on how they might be used (and abused) by researchers. In the current work, we test whether delegating parts of the research process to LLMs leads people to distrust researchers and devalues their scientific work. Participants (''N'' = 402) considered a researcher who delegates elements of the research process to a PhD student or LLM and rated three aspects of such delegation. Firstly, they rated whether it is morally appropriate to do so. Secondly, they judged whether—after deciding to delegate the research process—they would trust the scientist (who decided to delegate) to oversee future projects ... ('''[[Journal:Judgements of research co-created by generative AI: Experimental evidence|Full article...]]''')<br />
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Revision as of 15:26, 20 May 2024

Fig1 Niszczota EconBusRev23 9-2.png

"Judgements of research co-created by generative AI: Experimental evidence"

The introduction of ChatGPT has fuelled a public debate on the appropriateness of using generative artificial intelligence (AI) (large language models or LLMs) in work, including a debate on how they might be used (and abused) by researchers. In the current work, we test whether delegating parts of the research process to LLMs leads people to distrust researchers and devalues their scientific work. Participants (N = 402) considered a researcher who delegates elements of the research process to a PhD student or LLM and rated three aspects of such delegation. Firstly, they rated whether it is morally appropriate to do so. Secondly, they judged whether—after deciding to delegate the research process—they would trust the scientist (who decided to delegate) to oversee future projects ... (Full article...)
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