Difference between revisions of "Template:Article of the week"

From LIMSWiki
Jump to navigationJump to search
(Updated article of the week text)
(Updated article of the week text)
(64 intermediate revisions by the same user not shown)
Line 1: Line 1:
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:GA Karim JofKSUScience2022 34-2.jpg|240px]]</div>
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Bispo-Silva Geosciences23 13-11.png|240px]]</div>
'''"[[Journal:Development of Biosearch System for biobank management and storage of disease-associated genetic information|Development of Biosearch System for biobank management and storage of disease-associated genetic information]]"'''
'''"[[Journal:Geochemical biodegraded oil classification using a machine learning approach|Geochemical biodegraded oil classification using a machine learning approach]]"'''


Databases and software are important to manage modern high-throughput [[Laboratory|laboratories]] and store clinical and [[Genome informatics|genomic information]] for [[quality assurance]]. Commercial software is expensive, with proprietary code issues, while academic versions have adaptation issues. Our aim was to develop an adaptable in-house software system that can store specimen- and disease-associated genetic information in [[biobank]]s to facilitate [[translational research]]. A prototype was designed per the research requirements, and computational tools were used to develop the software under three tiers, using Visual Basic and ASP.net for the presentation tier, SQL Server for the data tier, and Ajax and JavaScript for the business tier. We retrieved specimens from the biobank using this software and performed microarray-based transcriptomic analysis to detect differentially expressed genes (DEGs) ... ('''[[Journal:Development of Biosearch System for biobank management and storage of disease-associated genetic information|Full article...]]''')<br />
[[Chromatography|Chromatographic]] oil analysis is an important step for the identification of biodegraded petroleum via peak visualization and interpretation of phenomena that explain the oil geochemistry. However, analyses of chromatogram components by geochemists are comparative, visual, and consequently slow. This article aims to improve the chromatogram analysis process performed during geochemical interpretation by proposing the use of [[convolutional neural network]]s (CNN), which are deep learning techniques widely used by big tech companies. Two hundred and twenty-one (221) chromatographic oil images from different worldwide basins (Brazil, USA, Portugal, Angola, and Venezuela) were used. The [[open-source software]] Orange Data Mining was used to process images by CNN. The CNN algorithm extracts, pixel by pixel, recurring features from the images through convolutional operations ... ('''[[Journal:Geochemical biodegraded oil classification using a machine learning approach|Full article...]]''')<br />
<br />
''Recently featured'':
''Recently featured'':
{{flowlist |
{{flowlist |
* [[Journal:Establishing a common nutritional vocabulary: From food production to diet|Establishing a common nutritional vocabulary: From food production to diet]]
* [[Journal:Knowledge of internal quality control for laboratory tests among laboratory personnel working in a biochemistry department of a tertiary care center: A descriptive cross-sectional study|Knowledge of internal quality control for laboratory tests among laboratory personnel working in a biochemistry department of a tertiary care center: A descriptive cross-sectional study]]
* [[Journal:Designing a knowledge management system for naval materials failures|Designing a knowledge management system for naval materials failures]]
* [[Journal:Sigma metrics as a valuable tool for effective analytical performance and quality control planning in the clinical laboratory: A retrospective study|Sigma metrics as a valuable tool for effective analytical performance and quality control planning in the clinical laboratory: A retrospective study]]
* [[Journal:Laboratory information management system for COVID-19 non-clinical efficacy trial data|Laboratory information management system for COVID-19 non-clinical efficacy trial data]]
* [[Journal:Why do we need food systems informatics? Introduction to this special collection on smart and connected regional food systems|Why do we need food systems informatics? Introduction to this special collection on smart and connected regional food systems]]
}}
}}

Revision as of 13:37, 13 May 2024

Fig1 Bispo-Silva Geosciences23 13-11.png

"Geochemical biodegraded oil classification using a machine learning approach"

Chromatographic oil analysis is an important step for the identification of biodegraded petroleum via peak visualization and interpretation of phenomena that explain the oil geochemistry. However, analyses of chromatogram components by geochemists are comparative, visual, and consequently slow. This article aims to improve the chromatogram analysis process performed during geochemical interpretation by proposing the use of convolutional neural networks (CNN), which are deep learning techniques widely used by big tech companies. Two hundred and twenty-one (221) chromatographic oil images from different worldwide basins (Brazil, USA, Portugal, Angola, and Venezuela) were used. The open-source software Orange Data Mining was used to process images by CNN. The CNN algorithm extracts, pixel by pixel, recurring features from the images through convolutional operations ... (Full article...)
Recently featured: