Difference between revisions of "File:Fig8 Garza BMCBioinformatics2016 17.gif"
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==Summary== | |||
{{Information | |||
|Description='''Fig. 8''' Overview of how CTDs interact with programming languages and workflow systems. CTDs can be generated by CTD-enabled tools (e.g., BALL, OpenMS, SeqAn) or via CTDopts. Once a tool is CTD-enabled, it can be imported into the KNIME Analytics Platform or Galaxy. We have also developed converters that can import KNIME Analytics Platform, Galaxy workflows into gUSE to take advantage of HPC resources and DCIs. | |||
|Source={{cite journal |title=From the desktop to the grid: Scalable bioinformatics via workflow conversion |journal=BMC Bioinformatics |author=de la Garza, L.; Veit, J.; Szolek, A.; Röttig, M.; Aiche, S.; Gesing, S.; Reinert, K.; Kohlbacher, O. |volume=17 |pages=127 |year=2016 |doi= 10.1186/s12859-016-0978-9 |pmid=26968893 |pmc=PMC4788856}} | |||
|Author=de la Garza, L.; Veit, J.; Szolek, A.; Röttig, M.; Aiche, S.; Gesing, S.; Reinert, K.; Kohlbacher, O. | |||
|Date=2016 | |||
|Permission=[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] | |||
}} | |||
== Licensing == | == Licensing == | ||
{{cc-by-4.0}} | {{cc-by-4.0}} | ||
Latest revision as of 16:15, 14 June 2016
Summary
| Description |
Fig. 8 Overview of how CTDs interact with programming languages and workflow systems. CTDs can be generated by CTD-enabled tools (e.g., BALL, OpenMS, SeqAn) or via CTDopts. Once a tool is CTD-enabled, it can be imported into the KNIME Analytics Platform or Galaxy. We have also developed converters that can import KNIME Analytics Platform, Galaxy workflows into gUSE to take advantage of HPC resources and DCIs. |
|---|---|
| Source |
de la Garza, L.; Veit, J.; Szolek, A.; Röttig, M.; Aiche, S.; Gesing, S.; Reinert, K.; Kohlbacher, O. (2016). "From the desktop to the grid: Scalable bioinformatics via workflow conversion". BMC Bioinformatics 17: 127. doi:10.1186/s12859-016-0978-9. PMC PMC4788856. PMID 26968893. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4788856. |
| Date |
2016 |
| Author |
de la Garza, L.; Veit, J.; Szolek, A.; Röttig, M.; Aiche, S.; Gesing, S.; Reinert, K.; Kohlbacher, O. |
| Permission (Reusing this file) |
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This work is licensed under the Creative Commons Attribution 4.0 License. |
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