OpenBIS - Revision history

Shawndouglas: /* Further reading */

2023-10-27T17:22:54Z

Shawndouglas: Minor updates

2021-05-04T17:14:01Z

Minor updates

← Older revision		Revision as of 17:14, 4 May 2021
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	\| genre = [[Laboratory informatics]] software		\| genre = [[Laboratory informatics]] software
	\| license = Apache Software License v2.0<ref name="BISCopy">{{cite web \|url=https://wiki-bsse.ethz.ch/display/bis/Copying \|title=Copying - openBIS \|author=Bernd, Rinn \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=11 December 2007 \|accessdate=26 September 2012}}</ref>		\| license = Apache Software License v2.0<ref name="BISCopy">{{cite web \|url=https://wiki-bsse.ethz.ch/display/bis/Copying \|title=Copying - openBIS \|author=Bernd, Rinn \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=11 December 2007 \|accessdate=26 September 2012}}</ref>
	\| website = [https://~~labnotebook~~.ch/ https://~~labnotebook~~.ch/]<br />[https://sis.id.ethz.ch/~~software~~/openbis.html https://sis.id.ethz.ch/~~software~~/openbis.html]		\| website = [https://openbis.ch/ https://openbis.ch/]<br />[https://sis.id.ethz.ch/services/rdm/openbis.html https://sis.id.ethz.ch/services/rdm/openbis.html]
	}}		}}

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	==Hardware/software requirements==		==Hardware/software requirements==

	Current (16.05) requirements include<ref name="BISSetupGuide">{{cite web \|url=https://~~wiki-bsse~~.ethz.ch/display/~~openBISDoc1605~~/openBIS+setup+guide \|title=openBIS Setup Guide \|publisher=Center for Information Science and Databases - ETHZ \|date=~~09 June 2016~~ \|accessdate=~~23 August 2016~~}}</ref>:		Current (16.05) requirements include<ref name="BISSetupGuide">{{cite web \|url=https://unlimited.ethz.ch/display/openBISDoc2010/openBIS+setup+guide \|title=openBIS Setup Guide \|publisher=Center for Information Science and Databases - ETHZ \|date=12 November 2020 \|accessdate=04 May 2021}}</ref>:

	* Linux or Mac OS X operating system		* Linux or Mac OS X operating system
	* PostgreSQL ~~9.1~~ or higher (with database superuser privileges)		* PostgreSQL 11 or higher (with database superuser privileges)
	* Java ~~1.6~~ or higher		* Java 11 or higher

	==Videos, screenshots, and other media==		==Videos, screenshots, and other media==

	Numerous videos for openBIS can be found on the [https://wiki-bsse.ethz.ch/pages/viewpage.action?pageId=43126125 openBIS website].		Numerous videos for openBIS can be found on the [https://wiki-bsse.ethz.ch/pages/viewpage.action?pageId=43126125 openBIS website].

	~~Webinars for the openBIS ELN-LIMS can be found on the [https://labnotebook.ch/index.php/screencasts/#video%20tutorials openBIS ELN-LIMS website].~~

	==Entities using openBIS==		==Entities using openBIS==
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	==External links==		==External links==

	* [https://~~wiki-bsse~~.ethz.ch/~~display/openBISDoc~~/openBIS ~~openBIS Sprint documentation~~]		* [https://sissource.ethz.ch/sispub/openbis openBIS source code]
	* [https://~~wiki-bsse~~.ethz.ch/display/~~openBISDoc1605~~/openBIS openBIS 16.05 documentation]		* [https://unlimited.ethz.ch/display/openBISDoc2010/openBIS+Documentation+Rel.+20.10+Home openBIS master documentation]
	* [https://~~wiki-bsse.ethz~~.ch/~~display~~/~~openBISDoc~~/~~openBIS+ELN~~-~~LIMS~~ openBIS ~~ELN-LIMS~~ documentation]		* [https://openbis.ch/index.php/docs/user-documentation openBIS user documentation]
			* [https://openbis.ch/index.php/docs/admin-documentation/ openBIS admin documentation]

	==References==		==References==

Barillac at 06:40, 17 April 2019

2019-04-17T06:40:46Z

← Older revision		Revision as of 06:40, 17 April 2019
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	\| genre = [[Laboratory informatics]] software		\| genre = [[Laboratory informatics]] software
	\| license = Apache Software License v2.0<ref name="BISCopy">{{cite web \|url=https://wiki-bsse.ethz.ch/display/bis/Copying \|title=Copying - openBIS \|author=Bernd, Rinn \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=11 December 2007 \|accessdate=26 September 2012}}</ref>		\| license = Apache Software License v2.0<ref name="BISCopy">{{cite web \|url=https://wiki-bsse.ethz.ch/display/bis/Copying \|title=Copying - openBIS \|author=Bernd, Rinn \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=11 December 2007 \|accessdate=26 September 2012}}</ref>
	\| website = [https://~~openbis-eln-lims.ethz~~.ch/ https://~~openbis-eln-lims.ethz~~.ch/]<br />[https://sis.id.ethz.ch/software/openbis.html https://sis.id.ethz.ch/software/openbis.html]		\| website = [https://labnotebook.ch/ https://labnotebook.ch/]<br />[https://sis.id.ethz.ch/software/openbis.html https://sis.id.ethz.ch/software/openbis.html]
	}}		}}

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	Numerous videos for openBIS can be found on the [https://wiki-bsse.ethz.ch/pages/viewpage.action?pageId=43126125 openBIS website].		Numerous videos for openBIS can be found on the [https://wiki-bsse.ethz.ch/pages/viewpage.action?pageId=43126125 openBIS website].

	Webinars for the openBIS ELN-LIMS can be found on the [https://~~openbis-eln-lims.ethz~~.ch/index.php/~~webinars~~/ openBIS ELN-LIMS website].		Webinars for the openBIS ELN-LIMS can be found on the [https://labnotebook.ch/index.php/screencasts/#video%20tutorials openBIS ELN-LIMS website].

	==Entities using openBIS==		==Entities using openBIS==

Shawndouglas: /* Features */ Clarified

2016-08-23T16:57:51Z

Features: Clarified

← Older revision		Revision as of 16:57, 23 August 2016
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	==Features==		==Features==

	openBIS ~~ELN-LIMS~~ features include<ref name="OBHomeRedirect" /~~><ref name="OB-ELNLIMSAddon">{{cite web \|url=https://sis.id.ethz.ch/software/eln.html \|title=openBIS ELN-LIMS for the Life Sciences \|publisher=ETH Zürich \|accessdate=23 August 2016}}</ref~~>:		openBIS features include<ref name="OBHomeRedirect" />:

	* high-content screening data management		* high-content screening data management
	* protein identification and quantification data management		* protein identification and quantification data management
	* Illumina NGS data management		* Illumina NGS data management

			The ELN-LIMS module adds<ref name="OB-ELNLIMSAddon">{{cite web \|url=https://sis.id.ethz.ch/software/eln.html \|title=openBIS ELN-LIMS for the Life Sciences \|publisher=ETH Zürich \|accessdate=23 August 2016}}</ref>:

	* ELN functionality		* ELN functionality
	* sample and SOP management		* sample and SOP management

Shawndouglas: /* Product history */ Removed name info

2016-08-23T16:56:39Z

Product history: Removed name info

← Older revision		Revision as of 16:56, 23 August 2016
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	In late September 2014, the openBIS team revealed an [[electronic laboratory notebook\|ELN]]-[[laboratory information management system\|LIMS]] plug-in that could be added that would add functionality like managing inventory, uploading data sets, managing experiments, and automate the creation of spaces, projects, and experiments in the system.<ref name="oBELN">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+for+ELN \|title=openBIS for ELN \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=26 September 2014 \|accessdate=07 October 2014}}</ref><ref name="FuentesSIS14">{{cite web \|url=https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|archiveurl=https://web.archive.org/web/20160823153756/https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|title=ELN-LIMS Project \|author=Fuentes, J. \|pages=15 \|publisher=ETH Zürich \|date=06 November 2014 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>. Work on the plug-in continued throughout 2015 and 2016 in sprint releaes<ref name="BISChangeLogArch1">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|archiveurl=https://web.archive.org/web/20160823154943/https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=19 August 2016 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>		In late September 2014, the openBIS team revealed an [[electronic laboratory notebook\|ELN]]-[[laboratory information management system\|LIMS]] plug-in that could be added that would add functionality like managing inventory, uploading data sets, managing experiments, and automate the creation of spaces, projects, and experiments in the system.<ref name="oBELN">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+for+ELN \|title=openBIS for ELN \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=26 September 2014 \|accessdate=07 October 2014}}</ref><ref name="FuentesSIS14">{{cite web \|url=https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|archiveurl=https://web.archive.org/web/20160823153756/https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|title=ELN-LIMS Project \|author=Fuentes, J. \|pages=15 \|publisher=ETH Zürich \|date=06 November 2014 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>. Work on the plug-in continued throughout 2015 and 2016 in sprint releaes<ref name="BISChangeLogArch1">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|archiveurl=https://web.archive.org/web/20160823154943/https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=19 August 2016 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>

	On May 11, 2016 a new major openBIS release became available as version 16.05. A user interface for the ELN-LIMS plug-in was added, and the plug-in was officially integrated into the openBIS 16.05 installer.<ref name="OB1605">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc1605/openBIS+Change+Log \|title=openBIS Change Log - openBIS Documentation Rel. 16.05 \|author=Franz-Josef, E. \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=18 May 2016 \|accessdate=23 August 2016}}</ref> The software began to be referred to as "openBIS ELN-LIMS."<ref name="OBELNLIMS">{{cite web \|url=https://openbis-eln-lims.ethz.ch/ \|title=openBIS ELN-LIMS \|publisher=Department of Biosystems Science and Engineering - ETHZ \|accessdate=23 August 2016}}</ref>		On May 11, 2016 a new major openBIS release became available as version 16.05. A user interface for the ELN-LIMS plug-in was added, and the plug-in was officially integrated into the openBIS 16.05 installer.<ref name="OB1605">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc1605/openBIS+Change+Log \|title=openBIS Change Log - openBIS Documentation Rel. 16.05 \|author=Franz-Josef, E. \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=18 May 2016 \|accessdate=23 August 2016}}</ref>

	==Features==		==Features==

Shawndouglas: Spacing

2016-08-23T16:55:33Z

Spacing

← Older revision		Revision as of 16:55, 23 August 2016
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	}}		}}

	'''openBIS''' is a free "open platform for managing scientific information ... [designed] to support research data workflows from bench to publication."<ref name="OBHomeRedirect">{{cite web \|url=https://sis.id.ethz.ch/software/openbis.html \|title=Data Management Software Platform openBIS \|publisher=ETH Zürich \|accessdate=23 August 2016}}</ref> The software comes bundled with an [[electronic laboratory notebook]]-[[laboratory information management system]] (ELN-LIMS) plug-in to extend the software's usefulness.<ref name="OBHomeRedirect" />		'''openBIS''' is a free "open platform for managing scientific information ... [designed] to support research data workflows from bench to publication."<ref name="OBHomeRedirect">{{cite web \|url=https://sis.id.ethz.ch/software/openbis.html \|title=Data Management Software Platform openBIS \|publisher=ETH Zürich \|accessdate=23 August 2016}}</ref> The software comes bundled with an [[electronic laboratory notebook]] - [[laboratory information management system]] (ELN-LIMS) plug-in to extend the software's usefulness.<ref name="OBHomeRedirect" />

	==Product history==		==Product history==

Shawndouglas: /* External links */ Fixed link to ELN-LIMS documentation

2016-08-23T16:54:18Z

External links: Fixed link to ELN-LIMS documentation

← Older revision		Revision as of 16:54, 23 August 2016
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	* [https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS openBIS Sprint documentation]		* [https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS openBIS Sprint documentation]
	* [https://wiki-bsse.ethz.ch/display/openBISDoc1605/openBIS openBIS 16.05 documentation]		* [https://wiki-bsse.ethz.ch/display/openBISDoc1605/openBIS openBIS 16.05 documentation]
	* [https://~~openbis~~-~~eln-lims~~.ethz.ch/ openBIS ELN-LIMS documentation]		* [https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+ELN-LIMS openBIS ELN-LIMS documentation]

	==References==		==References==

Shawndouglas: /* Product history */ Corrected internal links

2016-08-23T16:53:21Z

Product history: Corrected internal links

← Older revision		Revision as of 16:53, 23 August 2016
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	On April 4, 2013, the long series of "sprint releases" of the development version culminated in an official new production release as version 13.04.<ref name="BISPub4">{{cite web \|url=https://wiki-bsse.ethz.ch/pages/diffpages.action?originalId=96536728&pageId=96536730 \|title=Download Page - 04 April 2013 \|author=Chandrasekhar, Ramakrishnan \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=04 April 2013 \|accessdate=23 April 2013}}</ref> Development on the software continues with the original pattern of sprint releases, every two weeks.<ref name="BISChangeLog">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=20 December 2013 \|accessdate=02 March 2016}}</ref>		On April 4, 2013, the long series of "sprint releases" of the development version culminated in an official new production release as version 13.04.<ref name="BISPub4">{{cite web \|url=https://wiki-bsse.ethz.ch/pages/diffpages.action?originalId=96536728&pageId=96536730 \|title=Download Page - 04 April 2013 \|author=Chandrasekhar, Ramakrishnan \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=04 April 2013 \|accessdate=23 April 2013}}</ref> Development on the software continues with the original pattern of sprint releases, every two weeks.<ref name="BISChangeLog">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=20 December 2013 \|accessdate=02 March 2016}}</ref>

	In late September 2014, the openBIS team revealed an [[electronic laboratory notebook]]-[[laboratory information management system]] plug-in that could be added that would add functionality like managing inventory, uploading data sets, managing experiments, and automate the creation of spaces, projects, and experiments in the system.<ref name="oBELN">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+for+ELN \|title=openBIS for ELN \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=26 September 2014 \|accessdate=07 October 2014}}</ref><ref name="FuentesSIS14">{{cite web \|url=https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|archiveurl=https://web.archive.org/web/20160823153756/https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|title=ELN-LIMS Project \|author=Fuentes, J. \|pages=15 \|publisher=ETH Zürich \|date=06 November 2014 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>. Work on the plug-in continued throughout 2015 and 2016 in sprint releaes<ref name="BISChangeLogArch1">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|archiveurl=https://web.archive.org/web/20160823154943/https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=19 August 2016 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>		In late September 2014, the openBIS team revealed an [[electronic laboratory notebook\|ELN]]-[[laboratory information management system\|LIMS]] plug-in that could be added that would add functionality like managing inventory, uploading data sets, managing experiments, and automate the creation of spaces, projects, and experiments in the system.<ref name="oBELN">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+for+ELN \|title=openBIS for ELN \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=26 September 2014 \|accessdate=07 October 2014}}</ref><ref name="FuentesSIS14">{{cite web \|url=https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|archiveurl=https://web.archive.org/web/20160823153756/https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|title=ELN-LIMS Project \|author=Fuentes, J. \|pages=15 \|publisher=ETH Zürich \|date=06 November 2014 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>. Work on the plug-in continued throughout 2015 and 2016 in sprint releaes<ref name="BISChangeLogArch1">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|archiveurl=https://web.archive.org/web/20160823154943/https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=19 August 2016 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>

	On May 11, 2016 a new major openBIS release became available as version 16.05. A user interface for the ELN-LIMS plug-in was added, and the plug-in was officially integrated into the openBIS 16.05 installer.<ref name="OB1605">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc1605/openBIS+Change+Log \|title=openBIS Change Log - openBIS Documentation Rel. 16.05 \|author=Franz-Josef, E. \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=18 May 2016 \|accessdate=23 August 2016}}</ref> The software began to be referred to as "openBIS ELN-LIMS."<ref name="OBELNLIMS">{{cite web \|url=https://openbis-eln-lims.ethz.ch/ \|title=openBIS ELN-LIMS \|publisher=Department of Biosystems Science and Engineering - ETHZ \|accessdate=23 August 2016}}</ref>		On May 11, 2016 a new major openBIS release became available as version 16.05. A user interface for the ELN-LIMS plug-in was added, and the plug-in was officially integrated into the openBIS 16.05 installer.<ref name="OB1605">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc1605/openBIS+Change+Log \|title=openBIS Change Log - openBIS Documentation Rel. 16.05 \|author=Franz-Josef, E. \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=18 May 2016 \|accessdate=23 August 2016}}</ref> The software began to be referred to as "openBIS ELN-LIMS."<ref name="OBELNLIMS">{{cite web \|url=https://openbis-eln-lims.ethz.ch/ \|title=openBIS ELN-LIMS \|publisher=Department of Biosystems Science and Engineering - ETHZ \|accessdate=23 August 2016}}</ref>

Shawndouglas: Updated recent changes to meet LIMSwiki standards

2016-08-23T16:51:36Z

Updated recent changes to meet LIMSwiki standards

Show changes

Barillac at 11:37, 23 August 2016

2016-08-23T11:37:11Z

← Older revision		Revision as of 11:37, 23 August 2016
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	Webinars for the openBIS ELN-LIMS can be found on the [https://openbis-eln-lims.ethz.ch/index.php/webinars/ openBIS ELN-LIMS website].		Webinars for the openBIS ELN-LIMS can be found on the [https://openbis-eln-lims.ethz.ch/index.php/webinars/ openBIS ELN-LIMS website].

	~~Instructions for installing the ELN plug-in can be found [https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+ELN-LIMS here].~~

	==Entities using openBIS==		==Entities using openBIS==

← Older revision		Revision as of 17:22, 27 October 2023
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	==Further reading==		==Further reading==

	* {{cite journal \|journal=Bioinformatics \|title=openBIS ELN-LIMS: An open-source database for academic laboratories \|author=Barillari, Caterina; Ottoz, Diana S.M.; Fuentes-Serna, Juan M.; Ramakrishnan, Chandrasekhar; Rinn, Bernd; Rudolf, Fabian \|volume=32 \|issue=4 \|pages=638–640 \|year=2016 \|doi=10.1093/bioinformatics/btv606 \|pmid=26508761 \|pmc=PMC4743625}}		* {{cite journal \|journal=Bioinformatics \|title=openBIS ELN-LIMS: An open-source database for academic laboratories \|author=Barillari, Caterina; Ottoz, Diana S.M.; Fuentes-Serna, Juan M.; Ramakrishnan, Chandrasekhar; Rinn, Bernd; Rudolf, Fabian \|volume=32 \|issue=4 \|pages=638–640 \|year=2016 \|doi=10.1093/bioinformatics/btv606 \|pmid=26508761 \|pmc=PMC4743625}}

	* {{cite journal \|journal=BMC Bioinformatics \|title=openBIS: a flexible framework for managing and analyzing complex data in biology research \|author=Bauch, Angela; Adamczyk, Izabela; Buczek, Piotr; Elmer, Franz-Josef; Enimanev, Kaloyan; Glyzewski, Pawel; Kohler, Manuel; Pylak, Tomasz; Quandt, Andreas; Ramakrishnan, Chandrasekhar; Beisel, Christian; Malmström, Lars; Aebersold, Ruedi; Rinn, Bernd \|volume=12 \|pages=468 \|year=2011 \|doi=10.1186/1471-2105-12-468 \|pmid=22151573 \|pmc=PMC3275639}}		* {{cite journal \|journal=BMC Bioinformatics \|title=openBIS: a flexible framework for managing and analyzing complex data in biology research \|author=Bauch, Angela; Adamczyk, Izabela; Buczek, Piotr; Elmer, Franz-Josef; Enimanev, Kaloyan; Glyzewski, Pawel; Kohler, Manuel; Pylak, Tomasz; Quandt, Andreas; Ramakrishnan, Chandrasekhar; Beisel, Christian; Malmström, Lars; Aebersold, Ruedi; Rinn, Bernd \|volume=12 \|pages=468 \|year=2011 \|doi=10.1186/1471-2105-12-468 \|pmid=22151573 \|pmc=PMC3275639}}

← Older revision		Revision as of 16:53, 23 August 2016
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	On April 4, 2013, the long series of "sprint releases" of the development version culminated in an official new production release as version 13.04.<ref name="BISPub4">{{cite web \|url=https://wiki-bsse.ethz.ch/pages/diffpages.action?originalId=96536728&pageId=96536730 \|title=Download Page - 04 April 2013 \|author=Chandrasekhar, Ramakrishnan \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=04 April 2013 \|accessdate=23 April 2013}}</ref> Development on the software continues with the original pattern of sprint releases, every two weeks.<ref name="BISChangeLog">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=20 December 2013 \|accessdate=02 March 2016}}</ref>		On April 4, 2013, the long series of "sprint releases" of the development version culminated in an official new production release as version 13.04.<ref name="BISPub4">{{cite web \|url=https://wiki-bsse.ethz.ch/pages/diffpages.action?originalId=96536728&pageId=96536730 \|title=Download Page - 04 April 2013 \|author=Chandrasekhar, Ramakrishnan \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=04 April 2013 \|accessdate=23 April 2013}}</ref> Development on the software continues with the original pattern of sprint releases, every two weeks.<ref name="BISChangeLog">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=20 December 2013 \|accessdate=02 March 2016}}</ref>

	In late September 2014, the openBIS team revealed an [[electronic laboratory notebook]]-[[laboratory information management system]] plug-in that could be added that would add functionality like managing inventory, uploading data sets, managing experiments, and automate the creation of spaces, projects, and experiments in the system.<ref name="oBELN">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+for+ELN \|title=openBIS for ELN \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=26 September 2014 \|accessdate=07 October 2014}}</ref><ref name="FuentesSIS14">{{cite web \|url=https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|archiveurl=https://web.archive.org/web/20160823153756/https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|title=ELN-LIMS Project \|author=Fuentes, J. \|pages=15 \|publisher=ETH Zürich \|date=06 November 2014 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>. Work on the plug-in continued throughout 2015 and 2016 in sprint releaes<ref name="BISChangeLogArch1">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|archiveurl=https://web.archive.org/web/20160823154943/https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=19 August 2016 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>		In late September 2014, the openBIS team revealed an [[electronic laboratory notebook\|ELN]]-[[laboratory information management system\|LIMS]] plug-in that could be added that would add functionality like managing inventory, uploading data sets, managing experiments, and automate the creation of spaces, projects, and experiments in the system.<ref name="oBELN">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+for+ELN \|title=openBIS for ELN \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=26 September 2014 \|accessdate=07 October 2014}}</ref><ref name="FuentesSIS14">{{cite web \|url=https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|archiveurl=https://web.archive.org/web/20160823153756/https://wiki.systemsx.ch/download/attachments/91753082/Sybit%20ELN.pdf?version=1&modificationDate=1402649849499&api=v2 \|title=ELN-LIMS Project \|author=Fuentes, J. \|pages=15 \|publisher=ETH Zürich \|date=06 November 2014 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>. Work on the plug-in continued throughout 2015 and 2016 in sprint releaes<ref name="BISChangeLogArch1">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|archiveurl=https://web.archive.org/web/20160823154943/https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+Change+Log \|title=openBIS Change Log \|author=CISD Documentation Administrator \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=19 August 2016 \|archivedate=23 August 2016 \|accessdate=23 August 2016}}</ref>

	On May 11, 2016 a new major openBIS release became available as version 16.05. A user interface for the ELN-LIMS plug-in was added, and the plug-in was officially integrated into the openBIS 16.05 installer.<ref name="OB1605">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc1605/openBIS+Change+Log \|title=openBIS Change Log - openBIS Documentation Rel. 16.05 \|author=Franz-Josef, E. \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=18 May 2016 \|accessdate=23 August 2016}}</ref> The software began to be referred to as "openBIS ELN-LIMS."<ref name="OBELNLIMS">{{cite web \|url=https://openbis-eln-lims.ethz.ch/ \|title=openBIS ELN-LIMS \|publisher=Department of Biosystems Science and Engineering - ETHZ \|accessdate=23 August 2016}}</ref>		On May 11, 2016 a new major openBIS release became available as version 16.05. A user interface for the ELN-LIMS plug-in was added, and the plug-in was officially integrated into the openBIS 16.05 installer.<ref name="OB1605">{{cite web \|url=https://wiki-bsse.ethz.ch/display/openBISDoc1605/openBIS+Change+Log \|title=openBIS Change Log - openBIS Documentation Rel. 16.05 \|author=Franz-Josef, E. \|publisher=Department of Biosystems Science and Engineering - ETHZ \|date=18 May 2016 \|accessdate=23 August 2016}}</ref> The software began to be referred to as "openBIS ELN-LIMS."<ref name="OBELNLIMS">{{cite web \|url=https://openbis-eln-lims.ethz.ch/ \|title=openBIS ELN-LIMS \|publisher=Department of Biosystems Science and Engineering - ETHZ \|accessdate=23 August 2016}}</ref>