Main Page/Featured article of the week/2017 - Revision history

Shawndouglas: Text replacement - "\[\[Satya Sistemas Ltda.(.*)" to "[[Vendor:Satya Sistemas Ltda.$1"

2024-04-03T19:57:27Z

Text replacement - "\[\[Satya Sistemas Ltda.(.*)" to "[[Vendor:Satya Sistemas Ltda.$1"

← Older revision		Revision as of 19:57, 3 April 2024
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	Cytotoxicity assays have been used by researchers to screen for cytotoxicity in compound libraries. Researchers can either look for cytotoxic compounds or screen "hits" from initial high-throughput drug screens for unwanted cytotoxic effects before investing in their development as a pharmaceutical. These assays may be used as an alternative to animal experimentation and are becoming increasingly important in modern laboratories. However, the execution of these assays in large-scale and different laboratories requires, among other things, the management of protocols, reagents, and cell lines used, as well as the data produced, which can be a challenge. The management of all this information is greatly improved by the utilization of computational tools to save time and guarantee quality. However, a tool that performs this task designed specifically for cytotoxicity assays is not yet available.		Cytotoxicity assays have been used by researchers to screen for cytotoxicity in compound libraries. Researchers can either look for cytotoxic compounds or screen "hits" from initial high-throughput drug screens for unwanted cytotoxic effects before investing in their development as a pharmaceutical. These assays may be used as an alternative to animal experimentation and are becoming increasingly important in modern laboratories. However, the execution of these assays in large-scale and different laboratories requires, among other things, the management of protocols, reagents, and cell lines used, as well as the data produced, which can be a challenge. The management of all this information is greatly improved by the utilization of computational tools to save time and guarantee quality. However, a tool that performs this task designed specifically for cytotoxicity assays is not yet available.

	In this work, we have used a workflow based LIMS — [[Satya Sistemas Ltda.#Flux2\|the Flux system]] — and the Together Workflow Editor as a framework to develop FluxCTTX, a tool for management of data from cytotoxicity assays performed at different laboratories. ('''[[Journal:FluxCTTX: A LIMS-based tool for management and analysis of cytotoxicity assays data\|Full article...]]''')<br />		In this work, we have used a workflow based LIMS — [[Vendor:Satya Sistemas Ltda.#Flux2\|the Flux system]] — and the Together Workflow Editor as a framework to develop FluxCTTX, a tool for management of data from cytotoxicity assays performed at different laboratories. ('''[[Journal:FluxCTTX: A LIMS-based tool for management and analysis of cytotoxicity assays data\|Full article...]]''')<br />
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	\|<br /><h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">Featured article of the week: September 18–24:</h2>		\|<br /><h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">Featured article of the week: September 18–24:</h2>

Shawndouglas: Ombox header

2024-01-02T15:36:56Z

Ombox header

← Older revision		Revision as of 15:36, 2 January 2024
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	{{ombox		{{ombox
	\| type = notice		\| type = notice
	\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]] - [[Main Page/Featured article of the week/2021\|2021]] - [[Main Page/Featured article of the week/2022\|2022]] - [[Main Page/Featured article of the week/2023\|2023]]		\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]] - [[Main Page/Featured article of the week/2021\|2021]] - [[Main Page/Featured article of the week/2022\|2022]] - [[Main Page/Featured article of the week/2023\|2023]] - [[Main Page/Featured article of the week/2024\|2024]]
	}}		}}

Shawndouglas: Updated for 2023.

2023-01-03T15:41:29Z

Updated for 2023.

← Older revision		Revision as of 15:41, 3 January 2023
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	{{ombox		{{ombox
	\| type = notice		\| type = notice
	\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]] - [[Main Page/Featured article of the week/2021\|2021]] - [[Main Page/Featured article of the week/2022\|2022]]		\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]] - [[Main Page/Featured article of the week/2021\|2021]] - [[Main Page/Featured article of the week/2022\|2022]] - [[Main Page/Featured article of the week/2023\|2023]]
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Shawndouglas: Added 2022

2022-01-03T16:34:00Z

Added 2022

← Older revision		Revision as of 16:34, 3 January 2022
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	\| type = notice		\| type = notice
	\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]] - [[Main Page/Featured article of the week/2021\|2021]]		\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]] - [[Main Page/Featured article of the week/2021\|2021]] - [[Main Page/Featured article of the week/2022\|2022]]
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Shawndouglas: Added 2021

2021-06-17T00:06:42Z

Added 2021

← Older revision		Revision as of 00:06, 17 June 2021
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	\| type = notice		\| type = notice
	\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]]		\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]] - [[Main Page/Featured article of the week/2021\|2021]]
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Shawndouglas: Added 2020

2020-01-08T15:27:30Z

Added 2020

← Older revision		Revision as of 15:27, 8 January 2020
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	\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]]		\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]] - [[Main Page/Featured article of the week/2020\|2020]]
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Shawndouglas: Added 2019 to the top links

2019-01-07T16:29:54Z

Added 2019 to the top links

← Older revision		Revision as of 16:29, 7 January 2019
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	\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]]		\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]] - [[Main Page/Featured article of the week/2019\|2019]]
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Shawndouglas: Added 2018 to header

2018-01-08T17:22:54Z

Added 2018 to header

← Older revision		Revision as of 17:22, 8 January 2018
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	\| type = notice		\| type = notice
	\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017		\| text = If you're looking for other "Article of the Week" archives: [[Main Page/Featured article of the week/2014\|2014]] - [[Main Page/Featured article of the week/2015\|2015]] - [[Main Page/Featured article of the week/2016\|2016]] - 2017 - [[Main Page/Featured article of the week/2018\|2018]]
	}}		}}

Shawndouglas: Added last week's article of the week.

2018-01-02T16:06:19Z

Added last week's article of the week.

← Older revision		Revision as of 16:06, 2 January 2018
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	<!-- Below this line begin pasting previous news -->		<!-- Below this line begin pasting previous news -->
	<h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">Featured article of the week: December 18–24:</h2>		<h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">Featured article of the week: December 25–31:</h2>
			<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig2 Tremouilhac JOfChemoinfo2017 9.gif\|240px]]</div>
			'''"[[Journal:Chemotion ELN: An open-source electronic lab notebook for chemists in academia\|Chemotion ELN: An open-source electronic lab notebook for chemists in academia]]"'''

			The development of an [[electronic laboratory notebook]] (ELN) for researchers working in the field of chemical sciences is presented. The web-based application is available as open-source software that offers modern solutions for chemical researchers. The [[Chemotion ELN]] is equipped with the basic functionalities necessary for the acquisition and processing of chemical data, in particular work with molecular structures and calculations based on molecular properties. The ELN supports planning, description, storage, and management for the routine work of organic chemists. It also provides tools for communicating and sharing the recorded research data among colleagues. Meeting the requirements of a state-of-the-art research infrastructure, the ELN allows the search for molecules and reactions not only within the user’s data but also in conventional external sources as provided by SciFinder and PubChem. The presented development makes allowance for the growing dependency of scientific activity on the availability of digital [[information]] by providing open- source instruments to record and reuse research data. The current version of the ELN has been used for over half of a year in our chemistry research group, serving as a common infrastructure for chemistry research and enabling chemistry researchers to build their own databases of digital information as a prerequisite for the detailed, systematic investigation and evaluation of chemical reactions and mechanisms. ('''[[Journal:Chemotion ELN: An open-source electronic lab notebook for chemists in academia\|Full article...]]''')<br />
			\|-
			\|<br /><h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">Featured article of the week: December 18–24:</h2>
	<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Mayernik BigDataSoc2017 4-2.gif\|240px]]</div>		<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Mayernik BigDataSoc2017 4-2.gif\|240px]]</div>
	'''"[[Journal:Open data: Accountability and transparency\|Open data: Accountability and transparency]]"'''		'''"[[Journal:Open data: Accountability and transparency\|Open data: Accountability and transparency]]"'''

Shawndouglas: Added last week's article of the week.

2017-12-28T16:24:36Z

Added last week's article of the week.

← Older revision		Revision as of 16:24, 28 December 2017
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	<!-- Below this line begin pasting previous news -->		<!-- Below this line begin pasting previous news -->
	<h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">Featured article of the week: December 11–17:</h2>		<h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">Featured article of the week: December 18–24:</h2>
			<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Mayernik BigDataSoc2017 4-2.gif\|240px]]</div>
			'''"[[Journal:Open data: Accountability and transparency\|Open data: Accountability and transparency]]"'''

			The movements by national governments, funding agencies, universities, and research communities toward “open data” face many difficult challenges. In high-level visions of open data, researchers’ data and metadata practices are expected to be robust and structured. The integration of the internet into scientific institutions amplifies these expectations. When examined critically, however, the data and metadata practices of scholarly researchers often appear incomplete or deficient. The concepts of “accountability” and “transparency” provide insight in understanding these perceived gaps. Researchers’ primary accountabilities are related to meeting the expectations of research competency, not to external standards of data deposition or metadata creation. Likewise, making data open in a transparent way can involve a significant investment of time and resources with no obvious benefits. This paper uses differing notions of accountability and transparency to conceptualize “open data” as the result of ongoing achievements, not one-time acts. ('''[[Journal:Open data: Accountability and transparency\|Full article...]]''')<br />
			\|-
			\|<br /><h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">Featured article of the week: December 11–17:</h2>
	<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig3 Husen DataSciJourn2017 16-1.png\|240px]]</div>		<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig3 Husen DataSciJourn2017 16-1.png\|240px]]</div>
	'''"[[Journal:Recommended versus certified repositories: Mind the gap\|Recommended versus certified repositories: Mind the gap]]"'''		'''"[[Journal:Recommended versus certified repositories: Mind the gap\|Recommended versus certified repositories: Mind the gap]]"'''