Chemotion ELN - Revision history

Shawndouglas: Typos

2019-08-12T15:29:55Z

Typos

← Older revision		Revision as of 15:29, 12 August 2019
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	'''Chemotion ELN''' is an open-source [[electronic laboratory notebook]] (ELN) "or researchers working in the field of chemical sciences."<ref name="TremouilhacChemotionELN17">{{cite journal \|title=Chemotion ELN: An open source electronic lab notebook for chemists in academia \|journal=Journal of Cheminformatics \|author=Tremouilhac, P.; Nguyen, A.; Huang, Y.-C. et al. \|volume=9 \|pages=54 \|year=2017 \|doi=10.1186/s13321-017-0240-0}}</ref> The project has been funded since 2015 by by the German Research Foundation (Deutsche Forschungsgemeinschaft or DFG).<ref name="DFG266379491">{{cite web \|url=http://gepris.dfg.de/gepris/projekt/266379491 \|title=Deutsche Forschungsgemeinschaft (DFG) - Projektnummer 266379491 \|publisher=Deutsche Forschungsgemeinschaft \|date=2015 \|accessdate=04 December 2017}}</ref>		'''Chemotion ELN''' is an open-source [[electronic laboratory notebook]] (ELN) "for researchers working in the field of chemical sciences."<ref name="TremouilhacChemotionELN17">{{cite journal \|title=Chemotion ELN: An open source electronic lab notebook for chemists in academia \|journal=Journal of Cheminformatics \|author=Tremouilhac, P.; Nguyen, A.; Huang, Y.-C. et al. \|volume=9 \|pages=54 \|year=2017 \|doi=10.1186/s13321-017-0240-0}}</ref> The project has been funded since 2015 by the German Research Foundation (Deutsche Forschungsgemeinschaft or DFG).<ref name="DFG266379491">{{cite web \|url=http://gepris.dfg.de/gepris/projekt/266379491 \|title=Deutsche Forschungsgemeinschaft (DFG) - Projektnummer 266379491 \|publisher=Deutsche Forschungsgemeinschaft \|date=2015 \|accessdate=04 December 2017}}</ref>

	==Product history==		==Product history==

Shawndouglas: /* Product history */ Spacing

2017-12-04T20:50:01Z

Product history: Spacing

← Older revision		Revision as of 20:50, 4 December 2017
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	==Product history==		==Product history==
	The Chemotion ELN project was initiated to replace a basic ELN (dial-a-device project) programmed at the Karlsruhe Institute of Technology by Dominic Lütjohann from 2012 through 2014.<ref name="LütjohannOpenSource15">{{cite journal \|title=Open source life science automation: Design of experiments and data acquisition via “dial-a-device” \|journal=Chemometrics and Intelligent Laboratory Systems \|author=Lütjohann, D.S.; Jung, N.; Bräse, S. \|volume=144 \|pages=100–107 \|year=2015 \|doi=10.1016/j.chemolab.2015.04.002}}</ref><ref name="LütjohannLabormanagement14">{{cite web \|url=http://www.git-labor.de/forschung/informationstechnologie-it/labormanagement-wenn-analysegeraete-sprechen-lernen \|title=Labormanagement: Wenn Analysegeräte sprechen lernen… \|author=Lütjohann, D.; Jung, N.; Tremouilhac,P. et al. \|work=GIT Laborportal \|publisher=John Wiley & Sons \|date=28 November 2014 \|accessdate=04 December 2017}}</ref> Chemotion's code base is being developed by members of the Stefan Bräse group (ComPlat) at the Karlsruhe Institute of Technology (KIT)<ref name="LütjohannLabormanagement14" /> and NinjaConcept GmbH (Karlsruhe).<ref name="TremouilhacChemotionELN17" /> In June 2015, Florian Hübsch of NinjaConcept uploaded the first initial commits to the Chemotion ELN project on GitHub.<ref name="ChemotionELNInitial">{{cite web \|url=https://github.com/ComPlat/chemotion_ELN/commit/451d680aba8e993ac4402706b3d33579c1ecb1ea \|title=Initial commit \|work=Chemotion ELN \|publisher=GitHub, Inc \|date=16 June 2015 \|accessdate=06 October 2017}}</ref> An initial 0.1.0 release was uploaded to GitHub on May 31, 2016, followed by a 0.2.0 release in October.<ref name="ChemotionELNReleases" /> A journal article concerning the system was published in September 2017<ref name="TremouilhacChemotionELN17" />. Updates to the code appear to be ongoing, with a 0.3.0 update arriving in mid-November 2017, including an update to the reporting UI and the sample/reaction UI.<ref name="ChemotionELNReleases" />		The Chemotion ELN project was initiated to replace a basic ELN (dial-a-device project) programmed at the Karlsruhe Institute of Technology by Dominic Lütjohann from 2012 through 2014.<ref name="LütjohannOpenSource15">{{cite journal \|title=Open source life science automation: Design of experiments and data acquisition via “dial-a-device” \|journal=Chemometrics and Intelligent Laboratory Systems \|author=Lütjohann, D.S.; Jung, N.; Bräse, S. \|volume=144 \|pages=100–107 \|year=2015 \|doi=10.1016/j.chemolab.2015.04.002}}</ref><ref name="LütjohannLabormanagement14">{{cite web \|url=http://www.git-labor.de/forschung/informationstechnologie-it/labormanagement-wenn-analysegeraete-sprechen-lernen \|title=Labormanagement: Wenn Analysegeräte sprechen lernen… \|author=Lütjohann, D.; Jung, N.; Tremouilhac,P. et al. \|work=GIT Laborportal \|publisher=John Wiley & Sons \|date=28 November 2014 \|accessdate=04 December 2017}}</ref> Chemotion's code base is being developed by members of the Stefan Bräse group (ComPlat) at the Karlsruhe Institute of Technology (KIT)<ref name="LütjohannLabormanagement14" /> and NinjaConcept GmbH (Karlsruhe).<ref name="TremouilhacChemotionELN17" /> In June 2015, Florian Hübsch of NinjaConcept uploaded the first initial commits to the Chemotion ELN project on GitHub.<ref name="ChemotionELNInitial">{{cite web \|url=https://github.com/ComPlat/chemotion_ELN/commit/451d680aba8e993ac4402706b3d33579c1ecb1ea \|title=Initial commit \|work=Chemotion ELN \|publisher=GitHub, Inc \|date=16 June 2015 \|accessdate=06 October 2017}}</ref>

			An initial 0.1.0 release was uploaded to GitHub on May 31, 2016, followed by a 0.2.0 release in October.<ref name="ChemotionELNReleases" /> A journal article concerning the system was published in September 2017<ref name="TremouilhacChemotionELN17" />. Updates to the code appear to be ongoing, with a 0.3.0 update arriving in mid-November 2017, including an update to the reporting UI and the sample/reaction UI.<ref name="ChemotionELNReleases" />

	==Features==		==Features==

Shawndouglas: Updated per input by developer.

2017-12-04T20:43:42Z

Updated per input by developer.

← Older revision		Revision as of 20:43, 4 December 2017
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	\| discontinued =		\| discontinued =
	\| frequently updated = yes<!-- Release version update? Don't edit this page, just click on the version number! -->		\| frequently updated = yes<!-- Release version update? Don't edit this page, just click on the version number! -->
	\| programming language = Ruby, JavaScript		\| programming language = Ruby, JavaScript, CSS, and HTML
	\| operating system = platform-independent		\| operating system = platform-independent
	\| platform =		\| platform =
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	'''Chemotion ELN''' is an open-source [[electronic laboratory notebook]] (ELN) "or researchers working in the field of chemical sciences."<ref name="TremouilhacChemotionELN17">{{cite journal \|title=Chemotion ELN: An open source electronic lab notebook for chemists in academia \|journal=Journal of Cheminformatics \|author=Tremouilhac, P.; Nguyen, A.; Huang, Y.-C. et al. \|volume=9 \|pages=54 \|year=2017 \|doi=10.1186/s13321-017-0240-0}}</ref>		'''Chemotion ELN''' is an open-source [[electronic laboratory notebook]] (ELN) "or researchers working in the field of chemical sciences."<ref name="TremouilhacChemotionELN17">{{cite journal \|title=Chemotion ELN: An open source electronic lab notebook for chemists in academia \|journal=Journal of Cheminformatics \|author=Tremouilhac, P.; Nguyen, A.; Huang, Y.-C. et al. \|volume=9 \|pages=54 \|year=2017 \|doi=10.1186/s13321-017-0240-0}}</ref> The project has been funded since 2015 by by the German Research Foundation (Deutsche Forschungsgemeinschaft or DFG).<ref name="DFG266379491">{{cite web \|url=http://gepris.dfg.de/gepris/projekt/266379491 \|title=Deutsche Forschungsgemeinschaft (DFG) - Projektnummer 266379491 \|publisher=Deutsche Forschungsgemeinschaft \|date=2015 \|accessdate=04 December 2017}}</ref>

	==Product history==		==Product history==
	Chemotion ELN ~~seems~~ to ~~have originated in some form as~~ a ~~coding~~ project by ~~Florian Hübsch~~ of NinjaConcept GmbH.<ref name="TremouilhacChemotionELN17" /> In June 2015, Hübsch ~~provided~~ the first initial commits to the Chemotion ELN project on GitHub.<ref name="ChemotionELNInitial">{{cite web \|url=https://github.com/ComPlat/chemotion_ELN/commit/451d680aba8e993ac4402706b3d33579c1ecb1ea \|title=Initial commit \|work=Chemotion ELN \|publisher=GitHub, Inc \|date=16 June 2015 \|accessdate=06 October 2017}}</ref> ~~With the help of additional programmers and support from the Karlsruhe Institute of Technology, an~~ initial 0.1.0 release was uploaded to GitHub on May 31, 2016, followed by a 0.2.0 release in October.<ref name="ChemotionELNReleases" /> A journal article concerning the system was published in September 2017<ref name="TremouilhacChemotionELN17" />~~, and updates~~ to the code appear to be ongoing, with a 0.3.0 update arriving in mid-November 2017, including an update to the reporting UI and the sample/reaction UI.<ref name="ChemotionELNReleases" />		The Chemotion ELN project was initiated to replace a basic ELN (dial-a-device project) programmed at the Karlsruhe Institute of Technology by Dominic Lütjohann from 2012 through 2014.<ref name="LütjohannOpenSource15">{{cite journal \|title=Open source life science automation: Design of experiments and data acquisition via “dial-a-device” \|journal=Chemometrics and Intelligent Laboratory Systems \|author=Lütjohann, D.S.; Jung, N.; Bräse, S. \|volume=144 \|pages=100–107 \|year=2015 \|doi=10.1016/j.chemolab.2015.04.002}}</ref><ref name="LütjohannLabormanagement14">{{cite web \|url=http://www.git-labor.de/forschung/informationstechnologie-it/labormanagement-wenn-analysegeraete-sprechen-lernen \|title=Labormanagement: Wenn Analysegeräte sprechen lernen… \|author=Lütjohann, D.; Jung, N.; Tremouilhac,P. et al. \|work=GIT Laborportal \|publisher=John Wiley & Sons \|date=28 November 2014 \|accessdate=04 December 2017}}</ref> Chemotion's code base is being developed by members of the Stefan Bräse group (ComPlat) at the Karlsruhe Institute of Technology (KIT)<ref name="LütjohannLabormanagement14" /> and NinjaConcept GmbH (Karlsruhe).<ref name="TremouilhacChemotionELN17" /> In June 2015, Florian Hübsch of NinjaConcept uploaded the first initial commits to the Chemotion ELN project on GitHub.<ref name="ChemotionELNInitial">{{cite web \|url=https://github.com/ComPlat/chemotion_ELN/commit/451d680aba8e993ac4402706b3d33579c1ecb1ea \|title=Initial commit \|work=Chemotion ELN \|publisher=GitHub, Inc \|date=16 June 2015 \|accessdate=06 October 2017}}</ref> An initial 0.1.0 release was uploaded to GitHub on May 31, 2016, followed by a 0.2.0 release in October.<ref name="ChemotionELNReleases" /> A journal article concerning the system was published in September 2017<ref name="TremouilhacChemotionELN17" />. Updates to the code appear to be ongoing, with a 0.3.0 update arriving in mid-November 2017, including an update to the reporting UI and the sample/reaction UI.<ref name="ChemotionELNReleases" />

	==Features==		==Features==

Shawndouglas: /* Product history */ Updated.

2017-12-04T18:56:51Z

Product history: Updated.

← Older revision		Revision as of 18:56, 4 December 2017
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	==Product history==		==Product history==
	Chemotion ELN seems to have originated in some form as a coding project by Florian Hübsch of NinjaConcept GmbH.<ref name="TremouilhacChemotionELN17" /> In June 2015, Hübsch provided the first initial commits to the Chemotion ELN project on GitHub.<ref name="ChemotionELNInitial">{{cite web \|url=https://github.com/ComPlat/chemotion_ELN/commit/451d680aba8e993ac4402706b3d33579c1ecb1ea \|title=Initial commit \|work=Chemotion ELN \|publisher=GitHub, Inc \|date=16 June 2015 \|accessdate=06 October 2017}}</ref> With the help of additional programmers and support from the Karlsruhe Institute of Technology, an initial 0.1.0 release was uploaded to GitHub on May 31, 2016, followed by a 0.2.0 release in October.<ref name="ChemotionELNReleases" /> A journal article concerning the system was published in September 2017<ref name="TremouilhacChemotionELN17" />, and updates to the code appear to be ongoing.		Chemotion ELN seems to have originated in some form as a coding project by Florian Hübsch of NinjaConcept GmbH.<ref name="TremouilhacChemotionELN17" /> In June 2015, Hübsch provided the first initial commits to the Chemotion ELN project on GitHub.<ref name="ChemotionELNInitial">{{cite web \|url=https://github.com/ComPlat/chemotion_ELN/commit/451d680aba8e993ac4402706b3d33579c1ecb1ea \|title=Initial commit \|work=Chemotion ELN \|publisher=GitHub, Inc \|date=16 June 2015 \|accessdate=06 October 2017}}</ref> With the help of additional programmers and support from the Karlsruhe Institute of Technology, an initial 0.1.0 release was uploaded to GitHub on May 31, 2016, followed by a 0.2.0 release in October.<ref name="ChemotionELNReleases" /> A journal article concerning the system was published in September 2017<ref name="TremouilhacChemotionELN17" />, and updates to the code appear to be ongoing, with a 0.3.0 update arriving in mid-November 2017, including an update to the reporting UI and the sample/reaction UI.<ref name="ChemotionELNReleases" />

	==Features==		==Features==

Shawndouglas: Created as needed.

2017-10-06T20:57:37Z

Created as needed.

New page

{{Infobox software
| name = Chemotion ELN
| title = Chemotion ELN
| logo = 
| screenshot = 
| caption =
| collapsible =
| author = Stefan Braese, Nicole Jung, Serhii Kotov, Pierre Tremouilhac
| developer = Karlsruhe Institute of Technology
| released = {{Start date|2016|05|31}} (0.1.0)<ref name="ChemotionELNReleases">{{cite web |url=https://github.com/ComPlat/chemotion_ELN/releases |title=Chemotion ELN - Releases |work=Chemotion ELN |publisher=GitHub, Inc |accessdate=06 October 2017}}</ref>
| discontinued =
| frequently updated = yes
| programming language = Ruby, JavaScript
| operating system = platform-independent
| platform =
| size =
| language =
| status =
| genre = [[Laboratory informatics]] software
| license = GNU Affero General Public License v3.0
| website = [https://chemotion.net/ chemotion.net]
}}

'''Chemotion ELN''' is an open-source [[electronic laboratory notebook]] (ELN) "or researchers working in the field of chemical sciences."<ref name="TremouilhacChemotionELN17">{{cite journal |title=Chemotion ELN: An open source electronic lab notebook for chemists in academia |journal=Journal of Cheminformatics |author=Tremouilhac, P.; Nguyen, A.; Huang, Y.-C. et al. |volume=9 |pages=54 |year=2017 |doi=10.1186/s13321-017-0240-0}}</ref>

==Product history==
Chemotion ELN seems to have originated in some form as a coding project by Florian Hübsch of NinjaConcept GmbH.<ref name="TremouilhacChemotionELN17" /> In June 2015, Hübsch provided the first initial commits to the Chemotion ELN project on GitHub.<ref name="ChemotionELNInitial">{{cite web |url=https://github.com/ComPlat/chemotion_ELN/commit/451d680aba8e993ac4402706b3d33579c1ecb1ea |title=Initial commit |work=Chemotion ELN |publisher=GitHub, Inc |date=16 June 2015 |accessdate=06 October 2017}}</ref> With the help of additional programmers and support from the Karlsruhe Institute of Technology, an initial 0.1.0 release was uploaded to GitHub on May 31, 2016, followed by a 0.2.0 release in October.<ref name="ChemotionELNReleases" /> A journal article concerning the system was published in September 2017<ref name="TremouilhacChemotionELN17" />, and updates to the code appear to be ongoing.

==Features==
Features of Chemotion ELN include<ref name="TremouilhacChemotionELN17" />:

* processing of molecules and reactions
* sample and reaction tracking
* barcode support
* chemical drawing tools
* project and experiment planning
* query tools
* data sharing tools
* data import and export (Excel and sd)

==Hardware/software requirements==
Docker and docker-compose are used for the easiest installation, though Chemotion ELN can be installed (though more complicated) without Docker. Consult the [https://static-content.springer.com/esm/art%3A10.1186%2Fs13321-017-0240-0/MediaObjects/13321_2017_240_MOESM1_ESM.pdf documentation] (PDF) included with the developer's journal article.

==Videos, screenshots, and other media==

* [https://static-content.springer.com/esm/art%3A10.1186%2Fs13321-017-0240-0/MediaObjects/13321_2017_240_MOESM1_ESM.pdf Chemotion ELN documentation]

==Entities using Chemotion ELN==
Karlsruhe Institute of Technology

==Further reading==
* {{cite journal |title=Chemotion ELN: An open source electronic lab notebook for chemists in academia |journal=Journal of Cheminformatics |author=Tremouilhac, P.; Nguyen, A.; Huang, Y.-C. et al. |volume=9 |pages=54 |year=2017 |doi=10.1186/s13321-017-0240-0}}

==External links==

* [https://github.com/ComPlat/chemotion_ELN Chemotion ELN at GitHub]
* [https://chemotion.net/welcome Chemotion molecule repository]

==References==
<references />


[[Category:Bioinformatics software (open source)]]
[[Category:Electronic laboratory notebooks (open source)]]
[[Category:Laboratory informatics software (open source)]]