Book:LIMSjournal - Summer 2017 - Revision history

Shawndouglas: Updated so new print method will work

2018-12-07T15:00:50Z

Updated so new print method will work

Shawndouglas: Protected "Book:LIMSjournal - Summer 2017" ([Edit=Allow only administrators] (indefinite) [Move=Allow only administrators] (indefinite))

2017-07-07T18:32:11Z

Protected "Book:LIMSjournal - Summer 2017" ([Edit=Allow only administrators] (indefinite) [Move=Allow only administrators] (indefinite))

← Older revision	Revision as of 18:32, 7 July 2017
(No difference)

Shawndouglas: Created as needed.

2017-07-07T18:32:07Z

Created as needed.

New page

{{Saved book
|title= LIMSjournal - Summer 2017
|subtitle= Volume 3, Issue 2
|cover-image= Fig1 Bendou BiopresAndBiobank2017 15-2.gif
|cover-color= #eae374
| setting-papersize = A4
| setting-toc = 1
| setting-columns = 1
}}

== LIMSjournal - Summer 2017: Volume 3, Issue 2 ==
This collection of 13 open-access journal articles loaded to LIMSwiki in April–June 2017 is compiled as a convenient, easy-to-access compilation. It is organized alphabetically by topic and then by author, with the author and publication year appearing at the end for your convenience.

;1. Big data, informatics, and research
:[[Journal:Global data quality assessment and the situated nature of “best” research practices in biology|Global data quality assessment and the situated nature of “best” research practices in biology (Leonelli 2017)]]
:[[Journal:The FAIR Guiding Principles for scientific data management and stewardship|The FAIR Guiding Principles for scientific data management and stewardship (Wilkinson ''et al.'' 2016)]]

;2. Bioinformatics
:[[Journal:Analyzing the field of bioinformatics with the multi-faceted topic modeling technique|Analyzing the field of bioinformatics with the multi-faceted topic modeling technique (Heo ''et al.'' 2017)]]
:[[Journal:Intervene: A tool for intersection and visualization of multiple gene or genomic region sets|Intervene: A tool for intersection and visualization of multiple gene or genomic region sets (Khan and Mathelier 2017)]]

;3. Health, public health, and clinical informatics
:[[Journal:The state of open-source electronic health record projects: A software anthropology study|The state of open-source electronic health record projects: A software anthropology study (Alsaffar ''et al.'' 2017)]]
:[[Journal:Users’ perspectives on a picture archiving and communication system (PACS): An in-depth study in a teaching hospital in Kuwait|Users’ perspectives on a picture archiving and communication system (PACS): An in-depth study in a teaching hospital in Kuwait (Buabbas ''et al.'' 2016)]]
:[[Journal:The effect of a test ordering software intervention on the prescription of unnecessary laboratory tests - A randomized controlled trial|The effect of a test ordering software intervention on the prescription of unnecessary laboratory tests - A randomized controlled trial (Martins ''et al.'' 2017)]]
:[[Journal:Effective information extraction framework for heterogeneous clinical reports using online machine learning and controlled vocabularies|Effective information extraction framework for heterogeneous clinical reports using online machine learning and controlled vocabularies (Zheng ''et al.'' 2017)]]

;4. Laboratory information management systems
:[[Journal:Baobab Laboratory Information Management System: Development of an open-source laboratory information management system for biobanking|Baobab Laboratory Information Management System: Development of an open-source laboratory information management system for biobanking (Bendou ''et al.'' 2017)]]
:[[Journal:MASTR-MS: A web-based collaborative laboratory information management system (LIMS) for metabolomics|MASTR-MS: A web-based collaborative laboratory information management system (LIMS) for metabolomics (Hunter ''et al.'' 2017)]]
:[[Journal:Selecting a laboratory information management system for biorepositories in low- and middle-income countries: The H3Africa experience and lessons learned|Selecting a laboratory information management system for biorepositories in low- and middle-income countries: The H3Africa experience and lessons learned (Kyobe ''et al.'' 2017)]]

;5. Miscellaneous
:[[Journal:A multi-service data management platform for scientific oceanographic products|A multi-service data management platform for scientific oceanographic products (D’Anca ''et al.'' 2017)]]
:[[Journal:Neuroimaging, genetics, and clinical data sharing in Python using the CubicWeb framework|Neuroimaging, genetics, and clinical data sharing in Python using the CubicWeb framework (Grigis ''et al.'' 2017)]]


[[Category:LIMSwiki books compiling open-access journal articles]]

← Older revision		Revision as of 15:00, 7 December 2018
Line 15:		Line 15:
	:[[Journal:Global data quality assessment and the situated nature of “best” research practices in biology\|Global data quality assessment and the situated nature of “best” research practices in biology (Leonelli 2017)]]		:[[Journal:Global data quality assessment and the situated nature of “best” research practices in biology\|Global data quality assessment and the situated nature of “best” research practices in biology (Leonelli 2017)]]
	:[[Journal:The FAIR Guiding Principles for scientific data management and stewardship\|The FAIR Guiding Principles for scientific data management and stewardship (Wilkinson ''et al.'' 2016)]]		:[[Journal:The FAIR Guiding Principles for scientific data management and stewardship\|The FAIR Guiding Principles for scientific data management and stewardship (Wilkinson ''et al.'' 2016)]]

	;2. Bioinformatics		;2. Bioinformatics
	:[[Journal:Analyzing the field of bioinformatics with the multi-faceted topic modeling technique\|Analyzing the field of bioinformatics with the multi-faceted topic modeling technique (Heo ''et al.'' 2017)]]		:[[Journal:Analyzing the field of bioinformatics with the multi-faceted topic modeling technique\|Analyzing the field of bioinformatics with the multi-faceted topic modeling technique (Heo ''et al.'' 2017)]]
	:[[Journal:Intervene: A tool for intersection and visualization of multiple gene or genomic region sets\|Intervene: A tool for intersection and visualization of multiple gene or genomic region sets (Khan and Mathelier 2017)]]		:[[Journal:Intervene: A tool for intersection and visualization of multiple gene or genomic region sets\|Intervene: A tool for intersection and visualization of multiple gene or genomic region sets (Khan and Mathelier 2017)]]

	;3. Health, public health, and clinical informatics		;3. Health, public health, and clinical informatics
	:[[Journal:The state of open-source electronic health record projects: A software anthropology study\|The state of open-source electronic health record projects: A software anthropology study (Alsaffar ''et al.'' 2017)]]		:[[Journal:The state of open-source electronic health record projects: A software anthropology study\|The state of open-source electronic health record projects: A software anthropology study (Alsaffar ''et al.'' 2017)]]
Line 25:		Line 23:
	:[[Journal:The effect of a test ordering software intervention on the prescription of unnecessary laboratory tests - A randomized controlled trial\|The effect of a test ordering software intervention on the prescription of unnecessary laboratory tests - A randomized controlled trial (Martins ''et al.'' 2017)]]		:[[Journal:The effect of a test ordering software intervention on the prescription of unnecessary laboratory tests - A randomized controlled trial\|The effect of a test ordering software intervention on the prescription of unnecessary laboratory tests - A randomized controlled trial (Martins ''et al.'' 2017)]]
	:[[Journal:Effective information extraction framework for heterogeneous clinical reports using online machine learning and controlled vocabularies\|Effective information extraction framework for heterogeneous clinical reports using online machine learning and controlled vocabularies (Zheng ''et al.'' 2017)]]		:[[Journal:Effective information extraction framework for heterogeneous clinical reports using online machine learning and controlled vocabularies\|Effective information extraction framework for heterogeneous clinical reports using online machine learning and controlled vocabularies (Zheng ''et al.'' 2017)]]

	;4. Laboratory information management systems		;4. Laboratory information management systems
	:[[Journal:Baobab Laboratory Information Management System: Development of an open-source laboratory information management system for biobanking\|Baobab Laboratory Information Management System: Development of an open-source laboratory information management system for biobanking (Bendou ''et al.'' 2017)]]		:[[Journal:Baobab Laboratory Information Management System: Development of an open-source laboratory information management system for biobanking\|Baobab Laboratory Information Management System: Development of an open-source laboratory information management system for biobanking (Bendou ''et al.'' 2017)]]
	:[[Journal:MASTR-MS: A web-based collaborative laboratory information management system (LIMS) for metabolomics\|MASTR-MS: A web-based collaborative laboratory information management system (LIMS) for metabolomics (Hunter ''et al.'' 2017)]]		:[[Journal:MASTR-MS: A web-based collaborative laboratory information management system (LIMS) for metabolomics\|MASTR-MS: A web-based collaborative laboratory information management system (LIMS) for metabolomics (Hunter ''et al.'' 2017)]]
	:[[Journal:Selecting a laboratory information management system for biorepositories in low- and middle-income countries: The H3Africa experience and lessons learned\|Selecting a laboratory information management system for biorepositories in low- and middle-income countries: The H3Africa experience and lessons learned (Kyobe ''et al.'' 2017)]]		:[[Journal:Selecting a laboratory information management system for biorepositories in low- and middle-income countries: The H3Africa experience and lessons learned\|Selecting a laboratory information management system for biorepositories in low- and middle-income countries: The H3Africa experience and lessons learned (Kyobe ''et al.'' 2017)]]

	;5. Miscellaneous		;5. Miscellaneous
	:[[Journal:A multi-service data management platform for scientific oceanographic products\|A multi-service data management platform for scientific oceanographic products (D’Anca ''et al.'' 2017)]]		:[[Journal:A multi-service data management platform for scientific oceanographic products\|A multi-service data management platform for scientific oceanographic products (D’Anca ''et al.'' 2017)]]