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• Journal:Security architecture and protocol for trust verifications regarding the integrity of files stored in cloud services
  ...chitecture and protocol for trust verifications regarding the integrity of files stored in cloud services ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International]
  93 KB (14,047 words) - 00:38, 27 March 2019
• Journal:Handling metadata in a neurophysiology laboratory
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...dors, imposes the need to handle multiple files of different formats. Some files may even contain metadata that are not machine-readable and -interpretable.
  88 KB (13,049 words) - 18:41, 22 December 2017
• Journal:Mapping hierarchical file structures to semantic data models for efficient data integration into research data management systems
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...468 |issn=1471-2105 |pmc=PMC3275639 |pmid=22151573}}</ref> Sometimes, data files have to be uploaded using a web front-end<ref>{{Citation |last=Dudchenko |f
  61 KB (9,171 words) - 17:50, 11 June 2024
• Journal:SystemPipeR: NGS workflow and report generation environment
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...analyses (e.g., gene expression). Downstream derivatives of these targets files along with the corresponding SYSargs instances (see Fig. 1) are created aut
  46 KB (6,269 words) - 20:15, 27 August 2018
• Journal:SODAR: Managing multiomics study data and metadata
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...(material)|samples]] with their [[metadata]]. They must manage many large files that are the results of the assays or subsequent computation. Users with di
  61 KB (8,704 words) - 16:14, 29 March 2024
• Journal:Developing a file system structure to solve healthcare big data storage and archiving problems using a distributed file system
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...ting medical imaging that helps doctors with diagnoses, outputting digital files from various devices, and creating and storing the results of different sur
  79 KB (11,900 words) - 23:58, 11 April 2024
• LII:Laboratory Technology Planning and Management: The Practice of Laboratory Systems Engineering
  ...[https://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...on that computer—including operating system files, applications, and data files—and stores it in one big file referred to as a “container.” That cont
  218 KB (34,907 words) - 16:00, 29 March 2024
• Journal:ApE, A Plasmid Editor: A freely available DNA manipulation and visualization program
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...in the virtual filesystem of the .exe file are copies of the ApE accessory files (see below). The .exe is compiled as an x86-32-bit application, and the sof
  67 KB (10,248 words) - 22:34, 4 April 2024
• Journal:A robust, format-agnostic scientific data transfer framework
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...of terms found in ontologies tackled by ontological mapping projects, data files in the experimental sciences usually contain information relating to a few
  85 KB (12,243 words) - 18:56, 10 November 2016
• Journal:Principles of metadata organization at the ENCODE data coordination center
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...ed as input, the protocols and assays performed on these samples, the data files generated from the results and the computational methods used to analyze th
  43 KB (6,293 words) - 02:41, 7 September 2016
• Journal:Digital transformation risk management in forensic science laboratories
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...ce.<ref name="PollittAFrame19">{{cite web |url=https://www.nist.gov/system/files/documents/2018/01/10/osac_ts_0002.pdf |format=PDF |title=A Framework for Ha
  62 KB (8,461 words) - 19:39, 19 September 2021
• Journal:Sample identifiers and metadata to support data management and reuse in multidisciplinary ecosystem sciences
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...use, and other technical identifier characteristics, listed in Additional files, Supplemental Table 1.
  98 KB (13,366 words) - 16:40, 29 April 2024
• Journal:What is the "source" of open-source hardware?
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...that allows users to share a huge variety of 3D models based on CAD or STL files.}} may classify as OSH, similar to large community-based efforts such as th
  105 KB (14,517 words) - 18:47, 6 October 2021
• Journal:A data quality strategy to enable FAIR, programmatic access across large, diverse data collections for high performance data analysis
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...ance with recognized community standards (e.g., checking the header of the files to make sure it is compliant with community convention standard) and QA of
  72 KB (10,025 words) - 16:24, 29 April 2024
• Journal:Building infrastructure for African human genomic data management
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...10 |pmid=21245279 |pmc=PMC3083090}}</ref> The types of data and associated files for the H3Africa research projects are summarized in Table 1.
  36 KB (5,211 words) - 23:05, 11 November 2019
• Journal:Structure-based knowledge acquisition from electronic lab notebooks for research data provenance documentation
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...two formats are exports from the CZI files. The provenance of all attached files needs to be documented.
  124 KB (16,896 words) - 16:29, 29 April 2024
• Journal:Bioinformatics workflow for clinical whole genome sequencing at Partners HealthCare Personalized Medicine
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...d reads as well as the final variant calls (respective FASTQ, BAM, and VCF files).
  54 KB (7,025 words) - 22:12, 21 November 2016
• Journal:Methods for specifying scientific data standards and modeling relationships with applications to neuroscience
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...k of portability, scalability and a rigorous specification. For text-based files, languages and formats, such as the [[Extensible Markup Language]] (XML)<re
  77 KB (11,266 words) - 22:34, 20 February 2017
• Journal:NIMS-OS: An automation software to implement a closed loop between artificial intelligence and robotic experiments in materials science
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...st 110 Years of Laboratory Automation: Technologies, Applications, and the Creative Scientist |url=https://linkinghub.elsevier.com/retrieve/pii/S24726303220170
  77 KB (10,372 words) - 21:33, 20 November 2023
• Journal:SUSHI: An exquisite recipe for fully documented, reproducible and reusable NGS data analysis
  ...[http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International] ...bioinformaticians with the tasks of combining the tools, managing the data files and meta-information, documenting the analysis, and ensuring reproducibilit
  52 KB (7,043 words) - 18:19, 6 July 2016

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